ID A0A1Y1JMA6_PLAGO Unreviewed; 1930 AA.
AC A0A1Y1JMA6;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=DNA repair protein RAD50 {ECO:0000313|EMBL:GAW81962.1};
GN ORFNames=PGO_114160 {ECO:0000313|EMBL:GAW81962.1};
OS Plasmodium gonderi.
OC Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida;
OC Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).
OX NCBI_TaxID=77519 {ECO:0000313|EMBL:GAW81962.1, ECO:0000313|Proteomes:UP000195521};
RN [1] {ECO:0000313|Proteomes:UP000195521}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 30045 {ECO:0000313|Proteomes:UP000195521};
RA Arisue N., Honma H., Kawai S., Tougan T., Tanabe K., Horii T.;
RT "Plasmodium gonderi genome.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- SIMILARITY: Belongs to the SMC family. RAD50 subfamily.
CC {ECO:0000256|ARBA:ARBA00009439}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAW81962.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BDQF01000012; GAW81962.1; -; Genomic_DNA.
DR EnsemblProtists; GAW81962; GAW81962; PGO_114160.
DR OMA; NVILCHH; -.
DR OrthoDB; 5477220at2759; -.
DR Proteomes; UP000195521; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006302; P:double-strand break repair; IEA:InterPro.
DR GO; GO:0006996; P:organelle organization; IEA:UniProt.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038729; Rad50/SbcC_AAA.
DR PANTHER; PTHR18867:SF12; DNA REPAIR PROTEIN RAD50; 1.
DR PANTHER; PTHR18867; RAD50; 1.
DR Pfam; PF13476; AAA_23; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000195521};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 6..241
FT /note="Rad50/SbcC-type AAA"
FT /evidence="ECO:0000259|Pfam:PF13476"
FT COILED 219..319
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 525..569
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1042..1076
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1426..1505
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1551..1585
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1668..1695
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1930 AA; 228505 MW; 84B8E968652A5661 CRC64;
MTTLEKIGIQ GIRSYGDEEA QELEFASPIT VIYGNNGSGK STIIECLKVS CTGDFPPNAE
KGKSFIHDPL VSNKMNIRGK INLLLKNYNN KRVGISRSFN LFYCKDKNKK IKHTFRALDN
NIIIKKGKGQ EDVIITNKCV DINNHIPKLM GVSKALLENV ILCHHEESLW PFSESVKIKK
KFDELFGDDN FSKILDELIK CKKTMNDMLK RKEYELGTLK DFYEKKNNIT LEIQKNEKEI
ENSETLMQLH KEEIDQSLNM LQKLKKNNSI LSKLISHMDM YFVLYEKFQF DMENYKNMKE
IYEEDSKELQ QYAELLQKDL IRCETLIENV HLDIVELEKQ SNLDVYSCDE FDIKERDVIQ
ESLSQLERRK TNLKNLTKLI FDIDSSTFSM LKRRNIKRKM LSEEYIQLCH FMKSNEPIFV
YELEKWRFVF SKKPPNFKFN VGYERSSHSS RIAKDEKNQG ENSRGDITSL LHSRTLDEGE
ITNETSISDN LTNMFLIMEV RKMVRKHVHK LALIRTEVYE NIRERKKILK KKKNLIRKLE
KWKRRNSKVD KKIAKMKRYQ EKLTQLKWKD KLYESNINNL EKMNQIGCIY DSIELSELNF
NLIEMGCDIH TYTDNGIERK KEQLKKIQNL KKKLEKMFHI ATSFNTTYKH FLIIQSMNMN
IISFFHEQWA LFSELAKFSE IYNSIRVDNS DLYAYIENLV LYSDVTNSGL VEEKHEGYKW
CSDALAGVLW TKGERAIEKV TSEGARGEGK MGEGEIDERE INENEIDENE IDENEIDENE
IDENEIDENE IDEREIDENE IDEREINENE IDEANGGDMP KGNEIRVSIV HNQVGEITKR
DKIAKLKKCT SLENPCEVNS SKCEYKEYPK RIVNIKNKKR MNEFRDESCC SRLKRKKKII
EFFPQYGKNK NYMKILNDLL NVYVNKYEKK TNNIESKTLK LKEKLILICR ELDIVNNQTE
KYPEVLSQFR RMLEKINFKN MNDFINHFCH FKINIKKIKM DLITLRSKEE SLKFFLQDAQ
NLNSCHFCKS SISTSELSSF SILNAEKQRE EINQELEEKQ KLLTNLKSEK KEMKNLLVYY
YHNVEPICRD NNVLSDYLHF MKNELVNVQN GIHNCSMKIN NINENYELLM RLKKRCNHLV
ERETNVISMQ QQLYARHRKV KLALRNYRDI FSQGKECVQF FRSFLDELEV GTAEVEAAEV
VAAQVEDVGL IMEVKQFLLK SLPQYINLYD NKEIMNFFFQ KVSEHVESHL VRQFIEHESN
DIVEEESENH VMKKNKKYVD AFENSNLDEV GKTLTSQTEC DSTIENSRDT SSHDEGEEDL
IMRYSKSHLE GSLLENKDLL SNCTNGGEKS IILIKNLHAE WVKEKTIKRS EKCESIIMNN
INVMHMLKSV NLKNKEFLSL YDKLLLCINL EEMKKKQEID MIHRMKSVIK DRKEYVKKKI
DELQNNLERE KQIRESINKS EKYIAYYLGK KICIQKKEET ILTLMKRVQL EEKNMRRNIR
RKRNDILFLN KLYYIKINII KQLNNLLTEI NTEKEVKGNQ LRRVIEKIQN NQVIKNESNE
LVNKINKKKE QILCLQEEKI NIEKMHHNVV MNTNLKKMHE NFLNHQKNFI SSLNEFKNTF
FLHDKQEKQL NEINSMIKQL DEMYETDCDI YKFINESFTF LNYKNELLEL AYREEDNLRE
KIERHTKSVT DLKMKEAEMK GKIELRKEYV EKLISDRNSD SYTNIEKKYK KKIIEIFVYK
NVIKDICNFY NSFDQAIIKF HSLKMQEINI SIKNLWRRVY NSADIDYIYI KSDIQTENNG
KIQQRRSYNY RVVMVKDNCE LDMKGRCSSG QKVLSSIIIR LALAESFSIK CGILALDEPT
TNLDKSNSKN LASLIANIVD IRKESSSFQL ILITHDTYFV DILSQYGLTN CFYKIRKDNM
GYSKIIKIRN
//