ID   A0A1Y2A228_9PLEO        Unreviewed;      1124 AA.
AC   A0A1Y2A228;
DT   30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT   30-AUG-2017, sequence version 1.
DT   27-MAR-2024, entry version 16.
DE   SubName: Full=CPSF A subunit region-domain-containing protein {ECO:0000313|EMBL:ORY16460.1};
GN   ORFNames=BCR34DRAFT_106578 {ECO:0000313|EMBL:ORY16460.1};
OS   Clohesyomyces aquaticus.
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC   Pleosporomycetidae; Pleosporales; Lindgomycetaceae; Clohesyomyces.
OX   NCBI_TaxID=1231657 {ECO:0000313|EMBL:ORY16460.1, ECO:0000313|Proteomes:UP000193144};
RN   [1] {ECO:0000313|EMBL:ORY16460.1, ECO:0000313|Proteomes:UP000193144}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CBS 115471 {ECO:0000313|EMBL:ORY16460.1,
RC   ECO:0000313|Proteomes:UP000193144};
RG   DOE Joint Genome Institute;
RA   Mondo S.J., Dannebaum R.O., Kuo R.C., Labutti K., Haridas S., Kuo A.,
RA   Salamov A., Ahrendt S.R., Lipzen A., Sullivan W., Andreopoulos W.B.,
RA   Clum A., Lindquist E., Daum C., Ramamoorthy G.K., Gryganskyi A., Culley D.,
RA   Magnuson J.K., James T.Y., O'Malley M.A., Stajich J.E., Spatafora J.W.,
RA   Visel A., Grigoriev I.V.;
RT   "Pervasive Adenine N6-methylation of Active Genes in Fungi.";
RL   Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the RSE1 family.
CC       {ECO:0000256|ARBA:ARBA00038266}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ORY16460.1}.
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DR   EMBL; MCFA01000018; ORY16460.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1Y2A228; -.
DR   STRING; 1231657.A0A1Y2A228; -.
DR   OrthoDB; 101343at2759; -.
DR   Proteomes; UP000193144; Unassembled WGS sequence.
DR   GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   Gene3D; 1.10.150.910; -; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   PANTHER; PTHR10644:SF1; SPLICING FACTOR 3B SUBUNIT 3; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
PE   3: Inferred from homology;
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022728};
KW   mRNA splicing {ECO:0000256|ARBA:ARBA00022728};
KW   Reference proteome {ECO:0000313|Proteomes:UP000193144};
KW   Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT   DOMAIN          1..480
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          764..1088
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
FT   REGION          702..744
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        702..734
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1124 AA;  125656 MW;  563DEEA6610F7E59 CRC64;
     MMAAIEKDKL VWTLSRTGQT DVSISISSPL GVHRPQTLVY YALGMDVGYE NPIFALLEVD
     YSESDADPSG EAFHEVKKEL SYYELDLGLN HVVHRGRTTV DRTANMLFRV PGGNDLPSGV
     LCCGEDNISY YHVYEKEVFR LAIPRREGAA ENPNRKRYIV AGTLYTLKGG NFFYLLQTED
     GDVFKVTFDI KSGKVERLNI WYFDTIPVAS SICLLRAGFV YCASEAGDRL LYELETLGDE
     HNEHVFSSDQ FPTDPTETYN PPYFQVRPLR NLNPVEKVAN MSPVMDMEVA NLSMEDAPQI
     YTVSGTGARS TFRTTRNALD VLELVDSQLP QRATSVWTAK LRANDEHDTY IVLSLVNHTL
     VLRIGDDVEE AQHSGLLAET TTLGVQQFGE DCIIQIHPKG IRHIRTVPYN EEDPTQKMYG
     EITDWKTPAH RSIVACAANN RQVCIALSSG EIYYFACDYD SSLAQAEDEA QLDHTIHCLA
     MPDVPEGRQG SDFLAVGCGD KTFRIFNLNP RDQDHRILGQ TGLMGLSALP HAIAFHAMKD
     QSPAGYSLYA HVGLHSGIYV RALVDEFSGT LSGFRRRFLG PAPVKFARVS VGGEPAILAL
     TTRPWLAYTH PVNNTLALTP LNYMSIEAAW SFESASFKGI ICVRGEDLRI VTLDDVDLSQ
     NLSYEQISLQ YTPRKLVGNH EQQVYYVIES DNNTLDAATR DQLKREQDEK VKEEVKSEEE
     SEDKPMKTAE EEDLTNGELE NDEETNGELL PVDFGLPKVE GRWASCIQVV DPVTEKAVIH
     TIELRNNQCA VSAALIAFES KDNDLFFAVG VAQDLKFTPY SFSKAFIQLY KVSPDGRKLE
     FYHDTEVSAP PLALLAFKGK LIAGLGNDLV LFDCGLKHLL RKAQASNCTG TRITDLKTQG
     SRIVVADQSQ SVTYVVHKDM VHPNRLIPFA DDTVPRWTTC AEMADYDTTV GGDKFGNIWI
     VRCPEKVSQA SDESEDGQHL IQDKAYLGGA PNRLDLCAHY FTNDIPTAIQ KTNLIAGGDR
     IIFWAGLQGT LGVFVPFESR RDHKMFQQLE LLLRNEEKPI AGRDHLAYRS YYTPIKNVID
     GDLVERFLTA SNDEKASWAA QLDGAWDASS VEDKIWTMRL NFAF
//