ID   A0A1Y2AMW9_9FUNG        Unreviewed;       776 AA.
AC   A0A1Y2AMW9;
DT   30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT   30-AUG-2017, sequence version 1.
DT   27-MAR-2024, entry version 24.
DE   RecName: Full=NFACT RNA-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=BCR33DRAFT_120208 {ECO:0000313|EMBL:ORY23909.1};
OS   Rhizoclosmatium globosum.
OC   Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC   Chytridiomycota incertae sedis; Chytridiomycetes; Chytridiales;
OC   Chytriomycetaceae; Rhizoclosmatium.
OX   NCBI_TaxID=329046 {ECO:0000313|EMBL:ORY23909.1, ECO:0000313|Proteomes:UP000193642};
RN   [1] {ECO:0000313|EMBL:ORY23909.1, ECO:0000313|Proteomes:UP000193642}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JEL800 {ECO:0000313|EMBL:ORY23909.1,
RC   ECO:0000313|Proteomes:UP000193642};
RG   DOE Joint Genome Institute;
RA   Mondo S.J., Dannebaum R.O., Kuo R.C., Labutti K., Haridas S., Kuo A.,
RA   Salamov A., Ahrendt S.R., Lipzen A., Sullivan W., Andreopoulos W.B.,
RA   Clum A., Lindquist E., Daum C., Ramamoorthy G.K., Gryganskyi A., Culley D.,
RA   Magnuson J.K., James T.Y., O'Malley M.A., Stajich J.E., Spatafora J.W.,
RA   Visel A., Grigoriev I.V.;
RT   "Pervasive Adenine N6-methylation of Active Genes in Fungi.";
RL   Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the NEMF family.
CC       {ECO:0000256|ARBA:ARBA00008318}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ORY23909.1}.
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DR   EMBL; MCGO01000154; ORY23909.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1Y2AMW9; -.
DR   STRING; 329046.A0A1Y2AMW9; -.
DR   OrthoDB; 129892at2759; -.
DR   Proteomes; UP000193642; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0072344; P:rescue of stalled ribosome; IEA:UniProt.
DR   InterPro; IPR021846; NFACT-C.
DR   InterPro; IPR008532; NFACT_RNA-bd.
DR   PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR   PANTHER; PTHR15239:SF6; RIBOSOME QUALITY CONTROL COMPLEX SUBUNIT NEMF; 1.
DR   Pfam; PF11923; NFACT-C; 1.
DR   Pfam; PF05670; NFACT-R_1; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Reference proteome {ECO:0000313|Proteomes:UP000193642}.
FT   DOMAIN          310..423
FT                   /note="NFACT RNA-binding"
FT                   /evidence="ECO:0000259|Pfam:PF05670"
FT   DOMAIN          730..772
FT                   /note="NFACT protein C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF11923"
FT   REGION          187..233
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          488..510
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          544..719
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        187..208
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        209..233
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        488..506
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        548..572
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        601..636
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        644..687
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   776 AA;  85391 MW;  000792048CDD6ABD CRC64;
     MDLAFEGKHA FEGWITQVEH KGATLPNSES TQDTLIIYDE FHPYNFSQLA HLPADPPILH
     HNTFSKCVDE FFTHTESHRL QLRLHAAETS ASKKLASVSQ SHTAQVTRLQ TATQQSAKVA
     ACIESNLEVV DAVINTVRQF VASGMDWVEL WELVKEEARM GNYVASVITG LKLEVGVVSV
     GLLDPEFVDE EGDGGEDEDS EEESDSDDDA DVKAARGRKR AEKAKLEKER EKRRRENTLK
     IDSDIYLSAW GNARRYYDSK KLAAVKAEKT IHAVGKALKQ AEKKITQDLK ATKNAAPMIK
     TIRTPYWFEK YNWFISSENY LVVSGRDSAQ TDVLLRKYMR KDDVLVCADV EGAPAVLVIN
     SFSAGFGDVA GARPPGLTPE APIPPLTLHQ AGTMTVAHSK AWESKIITSA WWVRGDVVMK
     AGGIAPLSRG DKNYLPPVQL IYGFGLLFAV DEESSKRHFY ERRPWTRFGD VAAPETDGTA
     LVDLDEDEAD GNEAQEDSEE DAPIADQEPE SVVVNFDKYQ LEKPHAIELI DEPDVAVHEV
     SAEAVTNKNG NEKRKLSAKE RRELKKGVPP HDVMVEPTES ESVQDQKSQA ESDDDNESNN
     DETVAAQSFV PVASKSKLST PSIASKSSTN QTSAPRGKKG KLKKMKDKYA DQSDEEREVM
     MALLHGSESS AKKKKGGADD VKPGKGKAKQ PAPKGTPNKD AKKVAPPKPK TTAIAGGEFL
     GESTAPEEFS LSVLDSLTSQ PHPDDVLIAA IPVCLPWTCL AKYKYKVKLV PGYDCY
//