ID A0A1Y2AXL4_9FUNG Unreviewed; 545 AA.
AC A0A1Y2AXL4;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 13-SEP-2023, entry version 19.
DE RecName: Full=DNA primase {ECO:0000256|RuleBase:RU003514};
DE EC=2.7.7.- {ECO:0000256|RuleBase:RU003514};
GN ORFNames=LY90DRAFT_388509 {ECO:0000313|EMBL:ORY27030.1};
OS Neocallimastix californiae.
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Neocallimastigomycetes; Neocallimastigales;
OC Neocallimastigaceae; Neocallimastix.
OX NCBI_TaxID=1754190 {ECO:0000313|EMBL:ORY27030.1, ECO:0000313|Proteomes:UP000193920};
RN [1] {ECO:0000313|EMBL:ORY27030.1, ECO:0000313|Proteomes:UP000193920}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=G1 {ECO:0000313|EMBL:ORY27030.1,
RC ECO:0000313|Proteomes:UP000193920};
RG DOE Joint Genome Institute;
RA Haitjema C.H., Gilmore S.P., Henske J.K., Solomon K.V., De Groot R.,
RA Kuo A., Mondo S.J., Salamov A.A., Labutti K., Zhao Z., Chiniquy J.,
RA Barry K., Brewer H.M., Purvine S.O., Wright A.T., Boxma B., Van Alen T.,
RA Hackstein J.H., Baker S.E., Grigoriev I.V., O'Malley M.A.;
RT "A Parts List for Fungal Cellulosomes Revealed by Comparative Genomics.";
RL Submitted (AUG-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the eukaryotic-type primase small subunit
CC family. {ECO:0000256|ARBA:ARBA00009762, ECO:0000256|RuleBase:RU003514}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ORY27030.1}.
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DR EMBL; MCOG01000196; ORY27030.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y2AXL4; -.
DR STRING; 1754190.A0A1Y2AXL4; -.
DR OrthoDB; 168741at2759; -.
DR Proteomes; UP000193920; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003896; F:DNA primase activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd04860; AE_Prim_S; 1.
DR Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR InterPro; IPR002755; DNA_primase_S.
DR InterPro; IPR014052; DNA_primase_ssu_euk/arc.
DR NCBIfam; TIGR00335; primase_sml; 1.
DR PANTHER; PTHR10536; DNA PRIMASE SMALL SUBUNIT; 1.
DR PANTHER; PTHR10536:SF0; DNA PRIMASE SMALL SUBUNIT; 1.
DR Pfam; PF01896; DNA_primase_S; 1.
DR SUPFAM; SSF56747; Prim-pol domain; 1.
PE 3: Inferred from homology;
KW DNA replication {ECO:0000256|ARBA:ARBA00022705,
KW ECO:0000256|RuleBase:RU003514};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|RuleBase:RU003514};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Primosome {ECO:0000256|ARBA:ARBA00022515, ECO:0000256|RuleBase:RU003514};
KW Reference proteome {ECO:0000313|Proteomes:UP000193920};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU003514}.
FT REGION 1..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 83..106
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 545 AA; 63519 MW; 17AF5C0DD5D80588 CRC64;
MDTDAMEIDN IQDNENLIRN NTNDVSNSDK NNDNNKIDVE EDDSEDEFGD IDLNEDEINF
LMSPQSQKSN NFTMETGTPT KLNFNSTSNS VSNSVSNSNY SIDPNNTSIP IKSSQSTSMY
SYSQNLGSSI EDQEFLKNLE IYYENLFPYK QYYNWLSYGN VNKEYFPHRE FSFTLISDAY
IRFQSFLNEK ELKDNMLKYN PKKIDIGAVY NIRPNEKRKY LGVAFKPIEK ELVFDIDMTD
YDDIRTCCSG GNVCSKCWTF MTIAIKIIHR ILTEDFGFEH ILWVYSGRRG VHCWVCDERA
RKLSESARKA IVSYIEVIKG SDQQSKKVNL PTNLHPSLSE AENIVREYFP KLILEDMNIF
DKKKEYSKLL DIIPDDEIKA KLSKSWETSD NSPEYKWNEL SIEVEGKEKK KKELKNLVRD
IIFQYTYPRL DFNVSIHLNH LLKSPFCIHP GTGRVCVPID PEFCDDFDPL SVPTLNKLIE
ELSIIKKENI NNSPTRVNYL KSTSIAKYMK PFNKFLKSLE TEIHQARIIK KELEEQNLED
YLKTE
//