ID A0A1Y2BCX0_9FUNG Unreviewed; 1027 AA.
AC A0A1Y2BCX0;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE RecName: Full=PHD-type domain-containing protein {ECO:0000259|PROSITE:PS50016};
GN ORFNames=LY90DRAFT_73652 {ECO:0000313|EMBL:ORY32669.1};
OS Neocallimastix californiae.
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Neocallimastigomycetes; Neocallimastigales;
OC Neocallimastigaceae; Neocallimastix.
OX NCBI_TaxID=1754190 {ECO:0000313|EMBL:ORY32669.1, ECO:0000313|Proteomes:UP000193920};
RN [1] {ECO:0000313|EMBL:ORY32669.1, ECO:0000313|Proteomes:UP000193920}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=G1 {ECO:0000313|EMBL:ORY32669.1,
RC ECO:0000313|Proteomes:UP000193920};
RG DOE Joint Genome Institute;
RA Haitjema C.H., Gilmore S.P., Henske J.K., Solomon K.V., De Groot R.,
RA Kuo A., Mondo S.J., Salamov A.A., Labutti K., Zhao Z., Chiniquy J.,
RA Barry K., Brewer H.M., Purvine S.O., Wright A.T., Boxma B., Van Alen T.,
RA Hackstein J.H., Baker S.E., Grigoriev I.V., O'Malley M.A.;
RT "A Parts List for Fungal Cellulosomes Revealed by Comparative Genomics.";
RL Submitted (AUG-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ORY32669.1}.
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DR EMBL; MCOG01000163; ORY32669.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y2BCX0; -.
DR STRING; 1754190.A0A1Y2BCX0; -.
DR OrthoDB; 1332930at2759; -.
DR Proteomes; UP000193920; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15535; PHD1_Rco1; 1.
DR CDD; cd15534; PHD2_PHF12_Rco1; 1.
DR Gene3D; 2.30.30.1150; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR47636; TRANSCRIPTIONAL REGULATORY PROTEIN RCO1; 1.
DR PANTHER; PTHR47636:SF1; TRANSCRIPTIONAL REGULATORY PROTEIN RCO1; 1.
DR Pfam; PF00628; PHD; 2.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000193920};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 464..514
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 1..186
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 289..343
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 391..436
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 730..767
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..63
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..78
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 79..93
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 100..116
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 117..131
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 132..149
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 161..175
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 297..322
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 739..757
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1027 AA; 117454 MW; C957EF4A94E275A8 CRC64;
MLNKRASESD KQKTKKQRLN YDESDSQSVQ SKEDNSEQEN TPKRSTRLRS RTKSNDSKTK
TNEISIKKIT FVSSSVSEIK DDSKNKEENN DSNKITIPDL GRSLRKDKKQ DKNDIDSDTS
IASSVTSPRR GRKVSSKSDL SEAKSSKEKA KSKKSKSKMS SKSESTAVEN TISEGNSEDV
GEHIKLEEKI KPSRTIVVEI ENKNNLVKQE SITTISDVSD NSLQEIDATM NSVQTVSSVE
KDDSIENIQK SDQSISNIKT KKLNIKIKND NSNPKPNQFL TDKINNEIKD NNEDRNTTPT
PHNNSSHRQN NKTPTPSSNH YNSRSHNKRK KKSLKKSEVS SSGRSVYIPA GLVNPFREKS
HHQKVDERIK EDMNILRECI KSLSEINAKP LIENSETGTK KNENSQGTRR SLRRTSLANS
HSTNRVSSPK THHSPEQLTK LDSYNQGVLP FHALDDISKT EVNDDFCSIC RQSTGCFLCC
DSCPKSFHFD CINPPLDKSS IPEGIWECKE CRAKKNVELL KDNPNDNIWT KLSKDLDRHN
PKTFELPDWL VDEYENLTKN PVTGDYLDIS QWKSIRISRN GTISQPSQSE SYLKTIPICY
KCGEGITKDH LVQCDYCDLS WHLDCLDPPL SSNPNINVIL IGNANSNGII NKPNNNGNGH
DNGNDHVYSK ENIVIENHRI YGMKRKWMCP CHADWEMPKK RHKKSVIEVD IENLTEADFD
SIEEFEAGRI DNDEDYNENS KNNIPSNQQQ LSSDHTNTKD TNSKENNEVV KIKNENEINE
VKRENSEEPY KPDKLHYSDN VKEIKKEINP LYVELDKNNI NADAIQNEFI NHVQNIKSTL
RSYHSKVMNL PDQPIKYHSN IRSLYSNDDN KDLIPNIPEQ DIEDWLSTVS SLQQDIAREL
SYRKSMKKFW ENIRIEKLPD PPYDVYALRK KHLDKLEVLC KAALDPPYNQ YVTSKNVTQL
LDSKLLFNDD EKIKEKIMNE SDELTLDQNN ESSTTVGIIS KDDPLFKQFL SWRKICKTIL
KPSSSII
//
