ID A0A1Y2CDJ2_9FUNG Unreviewed; 1425 AA.
AC A0A1Y2CDJ2;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=BCR33DRAFT_716473 {ECO:0000313|EMBL:ORY45130.1};
OS Rhizoclosmatium globosum.
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Chytridiomycetes; Chytridiales;
OC Chytriomycetaceae; Rhizoclosmatium.
OX NCBI_TaxID=329046 {ECO:0000313|EMBL:ORY45130.1, ECO:0000313|Proteomes:UP000193642};
RN [1] {ECO:0000313|EMBL:ORY45130.1, ECO:0000313|Proteomes:UP000193642}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JEL800 {ECO:0000313|EMBL:ORY45130.1,
RC ECO:0000313|Proteomes:UP000193642};
RG DOE Joint Genome Institute;
RA Mondo S.J., Dannebaum R.O., Kuo R.C., Labutti K., Haridas S., Kuo A.,
RA Salamov A., Ahrendt S.R., Lipzen A., Sullivan W., Andreopoulos W.B.,
RA Clum A., Lindquist E., Daum C., Ramamoorthy G.K., Gryganskyi A., Culley D.,
RA Magnuson J.K., James T.Y., O'Malley M.A., Stajich J.E., Spatafora J.W.,
RA Visel A., Grigoriev I.V.;
RT "Pervasive Adenine N6-methylation of Active Genes in Fungi.";
RL Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ORY45130.1}.
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DR EMBL; MCGO01000020; ORY45130.1; -; Genomic_DNA.
DR STRING; 329046.A0A1Y2CDJ2; -.
DR OrthoDB; 1095660at2759; -.
DR Proteomes; UP000193642; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProt.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd17917; DEXHc_RHA-like; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.10.110.10; Ubiquitin Conjugating Enzyme; 1.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR019240; DUF2196.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR006575; RWD_dom.
DR InterPro; IPR016135; UBQ-conjugating_enzyme/RWD.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF256; ATP-DEPENDENT RNA HELICASE DHX57-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF09962; DUF2196; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR Pfam; PF05773; RWD; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF54495; UBC-like; 1.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50908; RWD; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:ORY45130.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000193642}.
FT DOMAIN 285..388
FT /note="RWD"
FT /evidence="ECO:0000259|PROSITE:PS50908"
FT DOMAIN 575..748
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 914..1069
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 136..163
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 175..211
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 480..523
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 865..923
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..49
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 137..163
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 175..201
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 486..523
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 902..923
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1425 AA; 157315 MW; 1BABA7EDCD119BF3 CRC64;
MGPNRQPRGK KKGGSSKPTK GRRDNERKAK EDPTDKKAKR AERDAKRKNF QAKLDKLKEG
LPRLQLDRNT INRLAHILDK YEKAKRQFGW TSKKKKRRRR RRAELELLAR LDQMDYYDDF
DDNDAKLLAR LNLIDLDDDS DSDDSEDDSD DDSEDEDSLD AEVVQDFMEN MDSDEDYDYE
DEEEEHEGDA FGNEDDYPEP PSELTESTLS ASASEGVAFK DLMWLQSLGY PQSRAVAALK
ATQSPVQALR HIYSQALKYE PSVHAIHTLL VFGQTRDGMH MMRAEEASVL ESMFGQDFEI
VNDTLWYIYL TAAIPASFLS KYTTKKLGEE SLYPYEAPVV VFQDETGRLP TRYSVALSMA
MQAKTREWIG SSMVFELVSW LQDPDEVADI LSNPPRDYLK MVEDDGSLSR VSSAPVVKKD
VGGSRSSGPV PKYHELKNGV GVAVTLKQDQ GTGRTVNGFV QEVLTNGNHP RGIKVRMKDA
NDRQTALQDS KSSGKSVQKN VLLKSRSSLD STMTSRSPSP TRVVASIQRA SKTFKSRIPE
AQLGKANQEV LDAFKKQQNT AAYGLPAFAL RETVLKAVRE NRVTIISGET GCGKSTQVPQ
FILDDAILSS RGAVTKILVT QPRRISALGL ADRVSSERGE SVGASVGYHI RLEHKMTDAT
KILFCTTGIL LRRLEENPAD GDTSGIDDVS HIIVDEVHER SLDSDFLLMV LKDLLNVRKD
LKIVLMSATL NAALFADYYG GAPTVHIPGR TFPVHALYLE DVLAKVKYMP IDKDLVRKNG
FPKKVEEKGK ENGSGRGKPV EFKGRGGAKI LYEEDRDDFN SDLELQESGA KSFLAMDPNK
IQYPLIEILV AGIVDKLLGG SARATVPGAA PPPSPGHDAN RGGRGGFRGG RGGRGGGRGG
FATSQGHQQQ PSGDLYYSGT NTSGEQAPNR GVLIFLPGFA EIATLHELLL QNPKIRAGLR
MESFGFQSTT DGAIKVVIAT NVAETSITID DVVFVIDAGK MKQTQFDAMK GMASLEECWV
SQANATQRRG RAGRVQEGTS PEIHRTPLEQ ICLRIKILPF LNGPIARVLS KVVEPPQPSA
VQAAIASLRV LQALTKNEEL TPLGFHLGRL PVDVRIGKLI LFGSIFGCLD SVLTIASAMS
VKSPFVAPFE KRHLADRKKL EFATGLSDHL TLLTAYNNWI AARRDGFPAE RAFLYDNFLS
GKTLTMIASV KRQLAEMLSD IGFVQVPIRA KEMERRGGRM SDGVADALGE IGAGRRGDDQ
ELIKGILVTA LYPNVIKIEA PRSGGGGGKE PSAQALKLTV KGGDPVFIHP TLWYNWKVGR
YPSQFLMFHE KVKTSKVYIR DCSCVSPFAL AFFGGKLTWD KRQRLLNLDD GWIRFAAVHK
EAAIIEATRT AFDELLQMKI ESPELDVSTT DLVKEIVQLV TRKGV
//
