ID A0A1Y2DTK4_9FUNG Unreviewed; 1033 AA.
AC A0A1Y2DTK4;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=HMG box domain-containing protein {ECO:0000259|PROSITE:PS50118};
GN ORFNames=LY90DRAFT_668383 {ECO:0000313|EMBL:ORY61965.1};
OS Neocallimastix californiae.
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Neocallimastigomycetes; Neocallimastigales;
OC Neocallimastigaceae; Neocallimastix.
OX NCBI_TaxID=1754190 {ECO:0000313|EMBL:ORY61965.1, ECO:0000313|Proteomes:UP000193920};
RN [1] {ECO:0000313|EMBL:ORY61965.1, ECO:0000313|Proteomes:UP000193920}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=G1 {ECO:0000313|EMBL:ORY61965.1,
RC ECO:0000313|Proteomes:UP000193920};
RG DOE Joint Genome Institute;
RA Haitjema C.H., Gilmore S.P., Henske J.K., Solomon K.V., De Groot R.,
RA Kuo A., Mondo S.J., Salamov A.A., Labutti K., Zhao Z., Chiniquy J.,
RA Barry K., Brewer H.M., Purvine S.O., Wright A.T., Boxma B., Van Alen T.,
RA Hackstein J.H., Baker S.E., Grigoriev I.V., O'Malley M.A.;
RT "A Parts List for Fungal Cellulosomes Revealed by Comparative Genomics.";
RL Submitted (AUG-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ORY61965.1}.
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DR EMBL; MCOG01000058; ORY61965.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y2DTK4; -.
DR STRING; 1754190.A0A1Y2DTK4; -.
DR OrthoDB; 1339449at2759; -.
DR Proteomes; UP000193920; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd00084; HMG-box_SF; 2.
DR Gene3D; 1.10.30.10; High mobility group box domain; 2.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR35711:SF1; ECTODERMAL, ISOFORM F; 1.
DR PANTHER; PTHR35711; EXPRESSED PROTEIN; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 2.
DR SUPFAM; SSF47095; HMG-box; 2.
DR PROSITE; PS50118; HMG_BOX_2; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000193920}.
FT DOMAIN 273..340
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 454..522
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 273..340
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 454..522
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 168..229
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 537..596
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 765..860
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 873..933
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 178..206
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 207..221
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 549..566
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 778..860
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 880..900
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1033 AA; 121623 MW; 03C553A8B1FD2EAD CRC64;
MVIHKYHVNI YIYDIEKNNS NRNEKINNTT TKNNEIVIEN AAKEKVPSEK QKYIHKKKLL
QMKENKIIER NINLILNKEK SLTGQKKIKR RDIDIVNQFQ LNALGYINFY SKKRNELLKS
NGQNNNNNIS NLNEEEIERL IDQEWIILEN KIKNRYIEES VQKQTKIVKK RLRNKKNIQN
NQKNFPNNVN NNQNVDNEIE NENNKNNNSN DNDRENEIGN ENHENNNQQL NYIPYIPDSE
MIKQELKDYT EINLLTELYN SAKEIPIPHF SVIKHPPNPF SIFTKDNIND IIKKNPTMTR
GQALKIVAKK WKNIDPEEKA KYIEKSKEYK EDYEDLVRYA YLQRALINNP NIARLCLENQ
LKENVNDEID QEDNIEKDNI DFKELNSDDE IIKAFKYIVR KFPKGYPLAS PVLRFPERVI
TQKFKKSKNK SIKNLNENET LSVSKSSVKI NINIKPKSQA FDYFVKDRYK IILKSTPTIS
LSDLFDELEK EWKYLSYDDK LPYILLEIKD VKRYYMDQCE ISKERRGRKH IISEILNENE
ENNNEGQNEE EETTMVVGNN SLEVNKNKKS QKIKRVKHRK GKKQQQQQQQ ENQHYSYNNN
ENLTLIEDSE NEQDYDSNLL YIEQNRILGR NAIDDNNKEQ YHSNNNINQF YYSNNNDNDN
AVDENYINSD TSEEYLPFDN ISRKFMFENL NDDEIENSAS KENVYDHFDI QTQINNNNKS
NNDNDRDNTF ISVASLANTN INDSLNYSFS QDTVVYPTNE NKINNIQYKE SNDSEFDENK
LMSPSQDSSN QNSERTTLET PSSNIESSMK NISMTSNLGK KPSYLNESNL ETPKNSQKSK
KISTTVQSFN KSRRLSSNIP KLSSPIKYKI SKRRIDEESE EENGEEFEEE EIEEVEESEE
ENNNHNITKE NDKDGEDDEI EEIPSQNKII NINKVDDLEE DPIPNKTSIS IDFNNNKTPV
NNSSNLNSNP LISTSSRKEK KDIFNNKFGN IFENSFVTPK KNAKSNKYKY NYSSNKKKNS
YYYGSERKKY DLF
//
