ID A0A1Y2F037_9BASI Unreviewed; 1137 AA.
AC A0A1Y2F037;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 13-SEP-2023, entry version 21.
DE RecName: Full=R3H domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=BCR35DRAFT_305534 {ECO:0000313|EMBL:ORY77238.1};
OS Leucosporidium creatinivorum.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC Microbotryomycetes; Leucosporidiales; Leucosporidium.
OX NCBI_TaxID=106004 {ECO:0000313|EMBL:ORY77238.1, ECO:0000313|Proteomes:UP000193467};
RN [1] {ECO:0000313|EMBL:ORY77238.1, ECO:0000313|Proteomes:UP000193467}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=62-1032 {ECO:0000313|EMBL:ORY77238.1,
RC ECO:0000313|Proteomes:UP000193467};
RG DOE Joint Genome Institute;
RA Mondo S.J., Dannebaum R.O., Kuo R.C., Labutti K., Haridas S., Kuo A.,
RA Salamov A., Ahrendt S.R., Lipzen A., Sullivan W., Andreopoulos W.B.,
RA Clum A., Lindquist E., Daum C., Ramamoorthy G.K., Gryganskyi A., Culley D.,
RA Magnuson J.K., James T.Y., O'Malley M.A., Stajich J.E., Spatafora J.W.,
RA Visel A., Grigoriev I.V.;
RT "Pervasive Adenine N6-methylation of Active Genes in Fungi.";
RL Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the NFX1 family.
CC {ECO:0000256|ARBA:ARBA00007269}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ORY77238.1}.
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DR EMBL; MCGR01000032; ORY77238.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y2F037; -.
DR STRING; 106004.A0A1Y2F037; -.
DR InParanoid; A0A1Y2F037; -.
DR OrthoDB; 1412at2759; -.
DR Proteomes; UP000193467; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd06008; NF-X1-zinc-finger; 5.
DR Gene3D; 3.30.1370.50; R3H-like domain; 1.
DR InterPro; IPR034078; NFX1_fam.
DR InterPro; IPR001374; R3H_dom.
DR InterPro; IPR036867; R3H_dom_sf.
DR InterPro; IPR000967; Znf_NFX1.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR001841; Znf_RING.
DR PANTHER; PTHR12360; NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1; 1.
DR PANTHER; PTHR12360:SF12; TRANSCRIPTIONAL REPRESSOR NF-X1; 1.
DR Pfam; PF01424; R3H; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00393; R3H; 1.
DR SMART; SM00438; ZnF_NFX; 7.
DR SUPFAM; SSF82708; R3H domain; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51061; R3H; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000193467};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 244..318
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 247..316
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 868..930
FT /note="R3H"
FT /evidence="ECO:0000259|PROSITE:PS51061"
FT REGION 1..227
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 66..80
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 106..177
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 194..227
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1137 AA; 120868 MW; EEB81541AFE6E754 CRC64;
MSSSPAAAPS ATAPSSSTTA PPPSNPPSSS STSTRGNGRP RNRRGRGAKG IAQQQIPAIQ
AGEAANAPPP STTSSRGGGT GRGSRGGRGG RGGSSRGGRG GGRAGAQNGV SQTGEGAEAA
QGDATSTPID GPSAPTTSTT RQQRLRNQSR SRQPTAQAQD GLTPSSSTAA TNAEPNPNAE
QPKPPARGGR RAKFNASLSS STSLHPTAAS FTPSTTPSHA HSHNPAPVSQ TLLSRLTTEL
TSGTAECSIC VSDISRTARI HSCSTCSTPF HLNCIKEWAT RSVNDSAERA RLLATSANPP
TDPRATEGSW RCPSCQSLSY SPSSIPTRYH CYCHRLLDPS HRPPTTPHSC GQPCAKPRPE
GCGHETCGLM CHPGPCPPCS VVLEKSCWCG DEEKRVRCSA MFPPRGVVSV GEEKEALLSC
GKICAKMLEC GMHVCERVCH EGACGGCEEV RRKRCFCGRG ERVEGCGVGS EARVEGCRRV
GKDGEEEKSE SWLGEWSCEE VCGAPFDCTH HSCTSPCHAH TSPSPLPVPS HPLKSQHATT
SRICSSSAEG GEGEGEEFMC GRVCKAMRTC GRHQCNRVCC PLSYQEALQL KSTNKRRGAT
NEQWQVEDDP LGIHACDRVC GRKLNCGVHF CEMGDHRGAC GPCLRADFDE LVCNCGSTVV
LPPIPCSYTI DCRHPCIRPS SCGHQTMPHA CHEDPIPCPP CPFLVEKECA CGKKRVGNVR
CSLGKEKVSC GTVCGKLLRC GFHRCRRSCH PSGSCESCDQ TCLKPLRLCH HPCPSPCHSP
TSCPTDSPCP KLITVTCACG HLQQSARCGS CDAKPEGNQG RLLKCGDACA AAKRSKQLAE
ALGVEKREPR VREVEYEPLM LSFYGANVAW CNSIEAQLAE FVKGDIPSLH FPVMKRPQRA
FTHELAELFD LRSESLDEEP RRSVVVHRQS NSAIPTPTLA NALIAQRKSA STTLTFGSLR
KPTQPEKKAS NAIYLEGVLG FDEAMLKDIL RPLTRGLVFS CTWVGEEDVL VTFDTSVPEI
LDPKLPLMVN SFRTLASDTG FCATVEPVHL SPEDGKITRG AWTPVASTSR SSGGNSWRNG
ASQNVFTPNA FASLGGGGTQ SAPTPARTAW GAGGGVVGPA AYKVRSSSFL RNLSLRR
//
