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Database: UniProt
Entry: A0A1Y2ID43_PYCCO
LinkDB: A0A1Y2ID43_PYCCO
Original site: A0A1Y2ID43_PYCCO 
ID   A0A1Y2ID43_PYCCO        Unreviewed;      1106 AA.
AC   A0A1Y2ID43;
DT   30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT   30-AUG-2017, sequence version 1.
DT   08-NOV-2023, entry version 23.
DE   RecName: Full=ubiquitinyl hydrolase 1 {ECO:0000256|ARBA:ARBA00012759};
DE            EC=3.4.19.12 {ECO:0000256|ARBA:ARBA00012759};
GN   ORFNames=PYCCODRAFT_1416510 {ECO:0000313|EMBL:OSC99045.1};
OS   Trametes coccinea BRFM310.
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Polyporales; Polyporaceae; Trametes.
OX   NCBI_TaxID=1353009 {ECO:0000313|EMBL:OSC99045.1, ECO:0000313|Proteomes:UP000193067};
RN   [1] {ECO:0000313|EMBL:OSC99045.1, ECO:0000313|Proteomes:UP000193067}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BRFM310 {ECO:0000313|EMBL:OSC99045.1,
RC   ECO:0000313|Proteomes:UP000193067};
RX   PubMed=26692083; DOI=10.1186/s13068-015-0407-8;
RA   Couturier M., Navarro D., Chevret D., Henrissat B., Piumi F.,
RA   Ruiz-Duenas F.J., Martinez A.T., Grigoriev I.V., Riley R., Lipzen A.,
RA   Berrin J.G., Master E.R., Rosso M.N.;
RT   "Enhanced degradation of softwood versus hardwood by the white-rot fungus
RT   Pycnoporus coccineus.";
RL   Biotechnol. Biofuels 8:216-216(2015).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Thiol-dependent hydrolysis of ester, thioester, amide, peptide
CC         and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-
CC         residue protein attached to proteins as an intracellular targeting
CC         signal).; EC=3.4.19.12; Evidence={ECO:0000256|ARBA:ARBA00000707};
CC   -!- SIMILARITY: Belongs to the peptidase C19 family.
CC       {ECO:0000256|ARBA:ARBA00009085}.
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DR   EMBL; KZ084131; OSC99045.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1Y2ID43; -.
DR   STRING; 1353009.A0A1Y2ID43; -.
DR   OrthoDB; 51419at2759; -.
DR   Proteomes; UP000193067; Unassembled WGS sequence.
DR   GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   CDD; cd02659; peptidase_C19C; 1.
DR   Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR   InterPro; IPR002083; MATH/TRAF_dom.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR001394; Peptidase_C19_UCH.
DR   InterPro; IPR008974; TRAF-like.
DR   InterPro; IPR024729; USP7_ICP0-binding_dom.
DR   InterPro; IPR029346; USP_C.
DR   InterPro; IPR018200; USP_CS.
DR   InterPro; IPR028889; USP_dom.
DR   PANTHER; PTHR24006; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR   PANTHER; PTHR24006:SF644; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE K02C4.3-RELATED; 1.
DR   Pfam; PF00917; MATH; 1.
DR   Pfam; PF00443; UCH; 1.
DR   Pfam; PF14533; USP7_C2; 1.
DR   Pfam; PF12436; USP7_ICP0_bdg; 1.
DR   SMART; SM00061; MATH; 1.
DR   SUPFAM; SSF54001; Cysteine proteinases; 1.
DR   SUPFAM; SSF49599; TRAF domain-like; 1.
DR   PROSITE; PS50144; MATH; 1.
DR   PROSITE; PS00972; USP_1; 1.
DR   PROSITE; PS00973; USP_2; 1.
DR   PROSITE; PS50235; USP_3; 1.
PE   3: Inferred from homology;
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Protease {ECO:0000256|ARBA:ARBA00022670};
KW   Reference proteome {ECO:0000313|Proteomes:UP000193067};
KW   Thiol protease {ECO:0000256|ARBA:ARBA00022807};
KW   Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786}.
FT   DOMAIN          47..179
FT                   /note="MATH"
FT                   /evidence="ECO:0000259|PROSITE:PS50144"
FT   DOMAIN          205..524
FT                   /note="USP"
FT                   /evidence="ECO:0000259|PROSITE:PS50235"
SQ   SEQUENCE   1106 AA;  128108 MW;  4BA3BBA7DAD80CF9 CRC64;
     MSDTMDALDE KVNGGPPMEV EEIVSVHDHE AFAAKHMPDL GHEVKDFKVF TWRLTNWKKL
     EKKLTSPEFE CGGHRWRILL FPFGNSNAPP NDTVSVYLDY ADPKRAPEGW HACAQFALVI
     SNIHDPTIYT VSHAHHRFIA EECDWGFTRF SELRKLFSVQ DGHTRPTIED ESADVSVFVR
     VLEDPTGVLW HNFVNYDSKK ETGYVGLKNQ GATCYMNSLL QSLFCTRYFR KAVYQIPTED
     DHPTESVPLA LQRVFYHLQT SDQPVGTTEL TKSFGWKSLD SFLQHDVQEF NRVLQDKLES
     KMKGTKAEGA IQKLFVGKMK SYIKCVNVDF ESSRIEEFND IQLNVKGMKN LYESFKDYVA
     VETLDGENKY MAEGYGLQEA KKGIIFQSFP PVLHLQLKRF EYDIQRDAMV KINDRHEFPF
     EIDLGEFLDE TADRSQPWVY KLHGVLVHSG DLHGGHYFAL IKPDRETRWL KFDDDRVTPV
     TDREVLEENY GGEVMTNGFP PMQRNQVRAM KRFTNAYMLV YIRESAIDEV LAPWKDEDTP
     AHLKRRLEEE RLQMEAKKRE REEQHLYLTA KVITDQTFAD HEGFDLASFD ERNWPATDLP
     SFRVLKNEPY STFKSRVAQH FNYPENQIRL WVLVNRQNKT VRPDTHIPEN EPQLTVEAIR
     NTMAVRQQND LRLYLDIIPD PSHPEIPPGS IMIFLKHFDI ANQRLTGVGK VYVPRSSKVS
     DLIPIINERM RWTPDTPLKL YEEIKPGMIE LMKPKLTFTQ SEIQDGDIIC FQVDMNEKEL
     HDFEAQGMYS NPVQYYDFLQ NRVMILFKPK FEETDAEHPE FHLTLSKKQN YDVMSAKVGE
     RLNWDPIKLR FTTTHSNGTP KQVLKRSLNQ SIQEIMQPAY VSPQTTVILY EKLDVSIVEL
     ETKRSLKVIW TGIHNKEEST HPFLLPKTSS VHDLAVELSK QVKLTPGGTG KIRFFEVSKD
     GKSQKEFTYS EMIGNIPDPV ELYAEEIPRE ELEADDADKV INVFHFSKEV SRTHGVPFRF
     VVKPNEKFSE TKKRLQARIG VSDKDFAKYR FALIQHATFK QPSYIEDEDT IYDHKFAPED
     VLGLDHVDKS GKTRTGAGEK AIVIRG
//
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