ID A0A1Y2LF60_9PROT Unreviewed; 174 AA.
AC A0A1Y2LF60;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=ECF family RNA polymerase sigma factor {ECO:0000313|EMBL:OSQ49719.1};
GN ORFNames=TALK_04305 {ECO:0000313|EMBL:OSQ49719.1};
OS Thalassospira alkalitolerans.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales;
OC Thalassospiraceae; Thalassospira.
OX NCBI_TaxID=1293890 {ECO:0000313|EMBL:OSQ49719.1, ECO:0000313|Proteomes:UP000193396};
RN [1] {ECO:0000313|EMBL:OSQ49719.1, ECO:0000313|Proteomes:UP000193396}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 18968 {ECO:0000313|EMBL:OSQ49719.1,
RC ECO:0000313|Proteomes:UP000193396};
RA Lai Q., Shao Z.;
RT "The draft genome sequence of Thalassospira alkalitolerans JCM 18968.";
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OSQ49719.1}.
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DR EMBL; JFKB01000002; OSQ49719.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y2LF60; -.
DR STRING; 1293890.TALK_04305; -.
DR OrthoDB; 9794372at2; -.
DR Proteomes; UP000193396; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR PANTHER; PTHR43133:SF69; RNA POLYMERASE SIGMA FACTOR FECI-RELATED; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
FT DOMAIN 14..80
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 113..164
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
SQ SEQUENCE 174 AA; 19674 MW; DD873005DB905771 CRC64;
MARNSASVLI ASFQENYEQL FRFLTRKLNG DCERAADVVQ DTYIRLADTP DPGEGIDNPR
AYIYRVAGNL AIDWLRREKR ITANHDVSED ADTIHDPKPG PEHIILGREQ ILLLDKALQK
LPEKPRAALL MFRVDGLSHS EIAQRLGVSN SMVAKYIARA LQHCRDELLR GGEK
//
