GenomeNet

Database: UniProt
Entry: A0A1Y2Q9W3_9SPHN
LinkDB: A0A1Y2Q9W3_9SPHN
Original site: A0A1Y2Q9W3_9SPHN 
ID   A0A1Y2Q9W3_9SPHN        Unreviewed;      1122 AA.
AC   A0A1Y2Q9W3;
DT   30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT   30-AUG-2017, sequence version 1.
DT   24-JAN-2024, entry version 25.
DE   RecName: Full=Chitooligosaccharide deacetylase {ECO:0000256|ARBA:ARBA00020071};
DE   AltName: Full=Nodulation protein B {ECO:0000256|ARBA:ARBA00032976};
GN   ORFNames=CAP40_17335 {ECO:0000313|EMBL:OSZ64412.1};
OS   Sphingomonas sp. IBVSS2.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingomonas.
OX   NCBI_TaxID=1985172 {ECO:0000313|EMBL:OSZ64412.1, ECO:0000313|Proteomes:UP000194216};
RN   [1] {ECO:0000313|EMBL:OSZ64412.1, ECO:0000313|Proteomes:UP000194216}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IBVSS2 {ECO:0000313|EMBL:OSZ64412.1,
RC   ECO:0000313|Proteomes:UP000194216};
RA   Orr R.J.;
RT   "Draft genome sequences of novel bacteria, isolated from environmental
RT   samples.";
RL   Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Is involved in generating a small heat-stable compound (Nod),
CC       an acylated oligomer of N-acetylglucosamine, that stimulates mitosis in
CC       various plant protoplasts. {ECO:0000256|ARBA:ARBA00003236}.
CC   -!- SIMILARITY: Belongs to the polysaccharide deacetylase family.
CC       {ECO:0000256|ARBA:ARBA00010973}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OSZ64412.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; NFUR01000005; OSZ64412.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1Y2Q9W3; -.
DR   STRING; 1985172.CAP40_17335; -.
DR   OrthoDB; 276604at2; -.
DR   Proteomes; UP000194216; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0008061; F:chitin binding; IEA:InterPro.
DR   GO; GO:0016810; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; IEA:InterPro.
DR   GO; GO:0000272; P:polysaccharide catabolic process; IEA:UniProtKB-KW.
DR   CDD; cd10962; CE4_GT2-like; 1.
DR   CDD; cd06423; CESA_like; 1.
DR   Gene3D; 3.10.50.10; -; 1.
DR   Gene3D; 3.20.20.80; Glycosidases; 1.
DR   Gene3D; 3.20.20.370; Glycoside hydrolase/deacetylase; 1.
DR   InterPro; IPR011583; Chitinase_II.
DR   InterPro; IPR029070; Chitinase_insertion_sf.
DR   InterPro; IPR011330; Glyco_hydro/deAcase_b/a-brl.
DR   InterPro; IPR001223; Glyco_hydro18_cat.
DR   InterPro; IPR017853; Glycoside_hydrolase_SF.
DR   InterPro; IPR002509; NODB_dom.
DR   InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR   PANTHER; PTHR43630; POLY-BETA-1,6-N-ACETYL-D-GLUCOSAMINE SYNTHASE; 1.
DR   PANTHER; PTHR43630:SF1; POLY-BETA-1,6-N-ACETYL-D-GLUCOSAMINE SYNTHASE; 1.
DR   Pfam; PF00704; Glyco_hydro_18; 1.
DR   Pfam; PF13641; Glyco_tranf_2_3; 1.
DR   Pfam; PF01522; Polysacc_deac_1; 1.
DR   SMART; SM00636; Glyco_18; 1.
DR   SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR   SUPFAM; SSF88713; Glycoside hydrolase/deacetylase; 1.
DR   SUPFAM; SSF53448; Nucleotide-diphospho-sugar transferases; 1.
DR   PROSITE; PS51910; GH18_2; 1.
DR   PROSITE; PS51677; NODB; 1.
PE   3: Inferred from homology;
KW   Carbohydrate metabolism {ECO:0000256|ARBA:ARBA00023326};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Nodulation {ECO:0000256|ARBA:ARBA00022458};
KW   Polysaccharide degradation {ECO:0000256|ARBA:ARBA00023326};
KW   Reference proteome {ECO:0000313|Proteomes:UP000194216};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        695..716
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        975..1008
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        1028..1047
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          86..393
FT                   /note="GH18"
FT                   /evidence="ECO:0000259|PROSITE:PS51910"
FT   DOMAIN          458..651
FT                   /note="NodB homology"
FT                   /evidence="ECO:0000259|PROSITE:PS51677"
FT   REGION          1100..1122
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1102..1122
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1122 AA;  122820 MW;  1F94E7C1BB8C21FD CRC64;
     MERPIFFDAS GKRNRWTMRA FFALLLVIVL AAGAFAMTVV RVPTPGPLAM ALEHPQPRSL
     KQQANRLRHS FASWLPQGPA KASAAPLAVG FYVPWDDASG ASLRRHINEL DWVVPSLYTV
     TGPQHHIATA PDTEFDPILA SATRRPKVLP MVQNATGDNW DSTGAAALLR DPKTRAAFLD
     ELQRALVARK ADGAVFDFEE LPTASQRDYL ALLREARARF AAAKMSIAVT VPAQDDDWNM
     KAYAAAADHV ILMNYDEHAP ATAAGPIASQ AWFVRQMNAA LTQVPAQKLI VGIANYGYNW
     TAPGKADPIS IEEAWLIAHD SEATVTFDKA SGNQSFAYEE NGIEHTVWMA DATTAWNQLR
     AANIKGVGGV ALWRLGSEDS NFWAALGAAH SGKIPDLRRI EAVGDVDVEG SGEILRITST
     PSVGARTIVQ NPQGLIVDEI FQSLPTPYVV TRTGYMPGKV ALTFDDGPDA DWTPKILDVL
     KQKQVTGTFF MIGENAMAEP FLVRRVVDEG HEIGSHTFTH PNLALTSSRG TRIELNATQR
     LIEAYTGRSV RLFRAPYFGD AEPTTADELI PALTAQRAGY TNVGLHVDPN DWQRPGVDAI
     VDTTLREVEA GNAEQSGQII LLHDGGGDRS QTLAALPRII DGLRAKGYQF VPVSQLAGLS
     RDQVMPEVQE GDLAAVRMDV GIFLVAATLG FMLKWSFFLA IALGIARALV LAGLAVNGNR
     RKNRPVAPEI VPDRFVSVLI PAYNEAKVIE ASIRRVLASE QVNVEVIVLD DGSQDGTGDL
     VRAAFADEPR VKLLTLENGG KARALNHGLA LARGDIVIAL DADTQFEPLT IARLARWFED
     PEVGAIAGNA KVGNRINLVT RWQAVEYVTS QNLERRALAS LDAIMVVPGA VGAWRKAALE
     DVGGYPIDTL AEDQDLTIAI QRKGWRVGYD IDAVAWTEAP ESFRALAKQR FRWAFGTLQC
     LWKHRAILRT RKPAGLALVG IPQAWVFQIA FALISPLIDL ALIASIVGTA IRVWQHGWAQ
     TESDVLRMGI YWISFMAIDF LCGWVAYRME KREKRYPGLL LLAQRFVYRQ LMYWVVIRAV
     ANALRGPWVG WGKLERSGRV EAQATPETQA AQETRETQAT AA
//
DBGET integrated database retrieval system