ID A0A1Y2STQ8_9GAMM Unreviewed; 602 AA.
AC A0A1Y2STQ8;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 24-JAN-2024, entry version 14.
DE SubName: Full=Rhs element Vgr family protein {ECO:0000313|EMBL:OTA21230.1};
GN ORFNames=Xbed_00884 {ECO:0000313|EMBL:OTA21230.1};
OS Xenorhabdus beddingii.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Morganellaceae; Xenorhabdus.
OX NCBI_TaxID=40578 {ECO:0000313|EMBL:OTA21230.1, ECO:0000313|Proteomes:UP000194204};
RN [1] {ECO:0000313|EMBL:OTA21230.1, ECO:0000313|Proteomes:UP000194204}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 4764 {ECO:0000313|EMBL:OTA21230.1,
RC ECO:0000313|Proteomes:UP000194204};
RA Tobias N.J., Wolff H., Djahanschiri B., Ebersberger I., Bode H.B.;
RT "Deconstructing symbiosis and pathogenesis requirements using a combined
RT genomic-metabolomic approach.";
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the VgrG protein family.
CC {ECO:0000256|ARBA:ARBA00005558}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OTA21230.1}.
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DR EMBL; MUBK01000004; OTA21230.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y2STQ8; -.
DR STRING; 40578.Xbed_00884; -.
DR Proteomes; UP000194204; Unassembled WGS sequence.
DR Gene3D; 2.30.110.50; -; 1.
DR Gene3D; 4.10.220.110; -; 1.
DR Gene3D; 3.55.50.10; Baseplate protein-like domains; 1.
DR Gene3D; 2.40.50.230; Gp5 N-terminal domain; 1.
DR InterPro; IPR006531; Gp5/Vgr_OB.
DR InterPro; IPR017847; T6SS_RhsGE_Vgr_subset.
DR InterPro; IPR006533; T6SS_Vgr_RhsGE.
DR InterPro; IPR037026; Vgr_OB-fold_dom_sf.
DR NCBIfam; TIGR01646; vgr_GE; 1.
DR NCBIfam; TIGR03361; VI_Rhs_Vgr; 1.
DR PANTHER; PTHR32305; -; 1.
DR PANTHER; PTHR32305:SF11; TYPE VI SECRETION SYSTEM SPIKE PROTEIN VGRG3; 1.
DR Pfam; PF04717; Phage_base_V; 1.
DR Pfam; PF05954; Phage_GPD; 1.
DR SUPFAM; SSF69255; gp5 N-terminal domain-like; 1.
DR SUPFAM; SSF69349; Phage fibre proteins; 1.
DR SUPFAM; SSF69279; Phage tail proteins; 2.
PE 3: Inferred from homology;
FT DOMAIN 389..453
FT /note="Gp5/Type VI secretion system Vgr protein OB-fold"
FT /evidence="ECO:0000259|Pfam:PF04717"
SQ SEQUENCE 602 AA; 67904 MW; 0C0D95A930CC9B75 CRC64;
MILKSGLRFL CRMGTLPENT FSVADFTLRE GLSDLFVLNL TLVCPHLRFG RPPEIDLNSL
LMQGAVFQVM QDMTLQRQVT GIISHAEWCS TDGNKTIYAF TVRPFLWRLT LNQDSHIYHR
QKVPAIMQTL LKKHHVKADS QLEDAHQDRE YTTQKRESDY AFFSRLAAEE GIAFWFEDDT
LFFSDSHLGM TADLPLQYNA QPETAHGVDS IYAVSLGVGM APQRSIHKDY NPDNPFYALS
HLESNPEYQA LGSLTPYTVY ESYGRFQKDA TAKPFLKYRH EFHKNQTQSG SGNSNCIKLM
PGKIFEIENH PHSPLNTRWQ IVEINHHGRC PEALGSSSGE GTTLSNDFSF IDGYADWRPP
FHYKPLADGD ESATVVGPEG EEIFVNKDGA IKVHFHWNRY DKADDGASCW VRVAQGWNGN
GFGFMAIPRI GQEVIVSYLN GDIDRPIVTG CVYNGLNRPP LDLPAAKTRT TFKTKTHKGE
GFNELRFEDA KGSEEVFIHA QKDMNTKVLN NRDTHVLANH SETVEKNQTI NVYKHKEEDI
GITHTHTVGE FLSITAGDVI ELRCGSSCLR MDKFGNVTIQ GIKFLFDAAD AIQISAQDID
LN
//