ID A0A1Y2SYS9_9BIFI Unreviewed; 216 AA.
AC A0A1Y2SYS9;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=Large ribosomal subunit protein uL3 {ECO:0000256|HAMAP-Rule:MF_01325};
GN Name=rplC {ECO:0000256|HAMAP-Rule:MF_01325};
GN ORFNames=ALMA_0612 {ECO:0000313|EMBL:OZG54151.1}, B9T39_04040
GN {ECO:0000313|EMBL:OTA29298.1};
OS Alloscardovia macacae.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Alloscardovia.
OX NCBI_TaxID=1160091 {ECO:0000313|EMBL:OTA29298.1, ECO:0000313|Proteomes:UP000243540};
RN [1] {ECO:0000313|EMBL:OZG54151.1, ECO:0000313|Proteomes:UP000243657}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 24762 {ECO:0000313|EMBL:OZG54151.1,
RC ECO:0000313|Proteomes:UP000243657};
RX PubMed=28764658; DOI=10.1186/s12864-017-3955-4;
RA Lugli G.A., Milani C., Turroni F., Duranti S., Mancabelli L.,
RA Mangifesta M., Ferrario C., Modesto M., Mattarelli P., Jiri K.,
RA van Sinderen D., Ventura M.;
RT "Comparative genomic and phylogenomic analyses of the Bifidobacteriaceae
RT family.";
RL BMC Genomics 18:568-568(2017).
RN [2] {ECO:0000313|EMBL:OTA29298.1, ECO:0000313|Proteomes:UP000243540}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UMA81212 {ECO:0000313|EMBL:OTA29298.1,
RC ECO:0000313|Proteomes:UP000243540};
RA Albert K., Sela D.A.;
RT "Draft genome sequences of Alloscardovia macacae UMA81211 and UMA81212
RT isolated from the feces of a rhesus macaque (Macaca mulatta).";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S
CC subunit. {ECO:0000256|HAMAP-Rule:MF_01325,
CC ECO:0000256|RuleBase:RU003906}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. Forms a cluster with
CC proteins L14 and L19. {ECO:0000256|HAMAP-Rule:MF_01325,
CC ECO:0000256|RuleBase:RU003906}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL3 family.
CC {ECO:0000256|ARBA:ARBA00006540, ECO:0000256|HAMAP-Rule:MF_01325,
CC ECO:0000256|RuleBase:RU003905}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OTA29298.1}.
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DR EMBL; NEKC01000007; OTA29298.1; -; Genomic_DNA.
DR EMBL; MWWT01000005; OZG54151.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y2SYS9; -.
DR STRING; 1160091.B9T39_04040; -.
DR OrthoDB; 9806135at2; -.
DR Proteomes; UP000243540; Unassembled WGS sequence.
DR Proteomes; UP000243657; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.160.810; -; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR HAMAP; MF_01325_B; Ribosomal_L3_B; 1.
DR InterPro; IPR000597; Ribosomal_uL3.
DR InterPro; IPR019927; Ribosomal_uL3_bac/org-type.
DR InterPro; IPR019926; Ribosomal_uL3_CS.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR NCBIfam; TIGR03625; L3_bact; 1.
DR PANTHER; PTHR11229:SF8; 39S RIBOSOMAL PROTEIN L3, MITOCHONDRIAL; 1.
DR PANTHER; PTHR11229; 50S RIBOSOMAL PROTEIN L3; 1.
DR Pfam; PF00297; Ribosomal_L3; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR PROSITE; PS00474; RIBOSOMAL_L3; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000243657};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01325};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01325};
KW RNA-binding {ECO:0000256|HAMAP-Rule:MF_01325,
KW ECO:0000256|RuleBase:RU003906};
KW rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01325,
KW ECO:0000256|RuleBase:RU003906}.
SQ SEQUENCE 216 AA; 23072 MW; 405E4ABAD3C1AE41 CRC64;
MTSNNNRQAL LGTKLGMSQM WDENGFFVPV TLVEVDTNVV TAVKNEESDG YKAVQIAYGA
IDPNKVTKPL AGHFAKAGVT PRRHLVEFRT EDVENYEPGQ ELTAEIFPDG AVVDVTGTTK
GKGFAGTIKR WGFKSYRRTH GSHKNERRPG SVGACATPSR ILKGKRMAGR MGHDTHTTLN
LTVVSSDAAN GVIAIKGAVP GPKGALVVVR TAVKGA
//
