ID A0A1Y2T258_SYMTR Unreviewed; 295 AA.
AC A0A1Y2T258;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE RecName: Full=tRNA-uridine 2-sulfurtransferase {ECO:0000256|ARBA:ARBA00011949};
DE EC=2.8.1.13 {ECO:0000256|ARBA:ARBA00011949};
DE Flags: Fragment;
GN ORFNames=A6D92_15825 {ECO:0000313|EMBL:OTA40560.1};
OS Symbiobacterium thermophilum.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Symbiobacteriaceae;
OC Symbiobacterium.
OX NCBI_TaxID=2734 {ECO:0000313|EMBL:OTA40560.1, ECO:0000313|Proteomes:UP000194267};
RN [1] {ECO:0000313|Proteomes:UP000194267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Antunes L.P., Martins L.F., Pereira R.V., Thomas A.M., Barbosa D.,
RA Nascimento L., Silva G.M., Condomitti G.W., Digiampietri L.A.,
RA Lombardi K.C., Ramos P.L., Quaggio R.B., Oliveira J.C., Pascon R.C.,
RA Cruz J.B., Silva A.M., Setubal J.C.;
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=AH2 + ATP + S-sulfanyl-L-cysteinyl-[protein] + uridine(34) in
CC tRNA = 2-thiouridine(34) in tRNA + A + AMP + diphosphate + H(+) + L-
CC cysteinyl-[protein]; Xref=Rhea:RHEA:47032, Rhea:RHEA-COMP:10131,
CC Rhea:RHEA-COMP:11726, Rhea:RHEA-COMP:11727, Rhea:RHEA-COMP:11728,
CC ChEBI:CHEBI:13193, ChEBI:CHEBI:15378, ChEBI:CHEBI:17499,
CC ChEBI:CHEBI:29950, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:61963, ChEBI:CHEBI:65315, ChEBI:CHEBI:87170,
CC ChEBI:CHEBI:456215; EC=2.8.1.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001042};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OTA40560.1}.
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DR EMBL; LWLV01001528; OTA40560.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y2T258; -.
DR Proteomes; UP000194267; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016783; F:sulfurtransferase activity; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
DR CDD; cd01998; tRNA_Me_trans; 1.
DR Gene3D; 2.30.30.280; Adenine nucleotide alpha hydrolases-like domains; 1.
DR Gene3D; 3.40.50.620; HUPs; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR InterPro; IPR046884; MnmA-like_central.
DR InterPro; IPR023382; MnmA-like_central_sf.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR004506; tRNA-specific_2-thiouridylase.
DR NCBIfam; TIGR00420; trmU; 1.
DR PANTHER; PTHR11933:SF5; MITOCHONDRIAL TRNA-SPECIFIC 2-THIOURIDYLASE 1; 1.
DR PANTHER; PTHR11933; TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE; 1.
DR Pfam; PF03054; tRNA_Me_trans; 1.
DR Pfam; PF20259; tRNA_Me_trans_M; 1.
DR SUPFAM; SSF52402; Adenine nucleotide alpha hydrolases-like; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694};
KW tRNA-binding {ECO:0000256|ARBA:ARBA00022555}.
FT DOMAIN 181..245
FT /note="tRNA-specific 2-thiouridylase MnmA-like central"
FT /evidence="ECO:0000259|Pfam:PF20259"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:OTA40560.1"
FT NON_TER 295
FT /evidence="ECO:0000313|EMBL:OTA40560.1"
SQ SEQUENCE 295 AA; 33468 MW; CB5B1F9806E453DF CRC64;
MNTWTDDIPE EIQMNQHSGC CSLAAVEDAR SVAHKLGIPY YVMNFQGQFA RTVIDYFIEE
YTRGRTPNPC IACNRYVKFS AFLEKARQLE CDYVATGHYA VIGRDDRFPG RWLLGKSADA
RKDQTYVLHN LTQEALAHTL FPVGHMQKSE VRALAKKYGF VTADKPDSQE ICFVYDNDYG
RFLKERVPEA IVPGPILNTR GEVIGQHQGL PLYTVGQRKG LGLTTRRPMY VVELDVERNA
LIVGEAEETY RPGLIASDLN WIAIPELTEP RRCRAKIRRM APEADCTIYP LDDGT
//
