ID A0A1Y3NBW7_PIRSE Unreviewed; 747 AA.
AC A0A1Y3NBW7;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=Nucleoporin Nup54 alpha-helical domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PIROE2DRAFT_69154 {ECO:0000313|EMBL:OUM64965.1};
OS Piromyces sp. (strain E2).
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Neocallimastigomycetes; Neocallimastigales;
OC Neocallimastigaceae; Piromyces.
OX NCBI_TaxID=73868 {ECO:0000313|EMBL:OUM64965.1, ECO:0000313|Proteomes:UP000195826};
RN [1] {ECO:0000313|EMBL:OUM64965.1, ECO:0000313|Proteomes:UP000195826}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=E2 {ECO:0000313|EMBL:OUM64965.1,
RC ECO:0000313|Proteomes:UP000195826};
RG DOE Joint Genome Institute;
RA Haitjema C.H., Gilmore S.P., Henske J.K., Solomon K.V., De Groot R.,
RA Kuo A., Mondo S.J., Salamov A.A., Labutti K., Zhao Z., Chiniquy J.,
RA Barry K., Brewer H.M., Purvine S.O., Wright A.T., Boxma B., Van Alen T.,
RA Hackstein J.H., Baker S.E., Grigoriev I.V., O'Malley M.A.;
RT "A Parts List for Fungal Cellulosomes Revealed by Comparative Genomics.";
RL Submitted (AUG-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC {ECO:0000256|ARBA:ARBA00004567}.
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DR EMBL; KZ150846; OUM64965.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y3NBW7; -.
DR STRING; 73868.A0A1Y3NBW7; -.
DR OMA; WHPLGVH; -.
DR Proteomes; UP000195826; Unassembled WGS sequence.
DR GO; GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
DR GO; GO:0017056; F:structural constituent of nuclear pore; IEA:InterPro.
DR GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0000055; P:ribosomal large subunit export from nucleus; IEA:InterPro.
DR GO; GO:0000056; P:ribosomal small subunit export from nucleus; IEA:InterPro.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR019321; Nucleoporin_Nup88.
DR InterPro; IPR037700; NUP88/NUP82.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR13257:SF0; NUCLEAR PORE COMPLEX PROTEIN NUP88; 1.
DR PANTHER; PTHR13257; NUCLEOPORIN NUP84-RELATED; 1.
DR Pfam; PF10168; Nup88; 2.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000195826};
KW Translocation {ECO:0000256|ARBA:ARBA00023010};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT COILED 586..613
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 747 AA; 85639 MW; ACB11B855D8E4E79 CRC64;
MEIDLSIFNY SLSKHSIWNQ CVNKNDSNTK KINDLIEVFE DDLFVCNNTT TFNCIRYLNL
KNFKGLCVKE EIDRTSFKKI IIDRKIDYYV NTITLNKNGK LLALVGEDGV NVMIIPQTIN
QINVEELRAN VITVGSDIYS SNSGIKIVKA AWHPLSSTNS HLVILSSDGC LRLFDVFSES
KEPEQRYFIG PQYYNEYKEF TSSVYIPGRS ISGNSEEMET VSFTFGNGDD WEIFTIYVLM
KNGDVYAICP FLPSKSTVKK SLLENLSLSI EQRWKESDPE DLVIDQQYRL QRCWISTVLQ
NLKPVKTSDL AEDEEVIING NISRFKDIHP IIQGPFLLQP APIDYDPDHC DVDNVASSIV
SLNTEPFSII VIAFTNGKVD VCLNVAPVEA LWMSNNDMIQ DFDLPVLAVY ETIDLKLNGN
LPNIKSNIVN IKEDKRYPDV CYIYHHGGVH TLSFNNWLSL FKDINNNTNL IQKFQDILKR
EIPSDVTLKV DTIAFGNENP VVGLTSTTGI FVGYNLLVLS AANQFVSIEL PIRIKRTPLL
FNKDNDSKTY KDLFPSIDIN CPIPVHLGSK KKSSGVYPNF VNENTLKFLA EQITDARNDL
TELEIYRNKI EKKVNMQSDE YFNQLKKLNS ISKRVNDNIK VNSEKLTERM TRIIDNQSKL
MKRADIILQI LFDHCQPELT EEERKWFNEL KHLSSIITKK HKPHIKQLRQ QLDMLKEETK
DKLEITEQAI QLGTSQKKSV FEALNQE
//
