ID A0A1Y3NZ07_PIRSE Unreviewed; 778 AA.
AC A0A1Y3NZ07;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=Elongator complex protein 2 {ECO:0000256|ARBA:ARBA00020267};
GN ORFNames=PIROE2DRAFT_1379 {ECO:0000313|EMBL:OUM70503.1};
OS Piromyces sp. (strain E2).
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Neocallimastigomycetes; Neocallimastigales;
OC Neocallimastigaceae; Piromyces.
OX NCBI_TaxID=73868 {ECO:0000313|EMBL:OUM70503.1, ECO:0000313|Proteomes:UP000195826};
RN [1] {ECO:0000313|EMBL:OUM70503.1, ECO:0000313|Proteomes:UP000195826}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=E2 {ECO:0000313|EMBL:OUM70503.1,
RC ECO:0000313|Proteomes:UP000195826};
RG DOE Joint Genome Institute;
RA Haitjema C.H., Gilmore S.P., Henske J.K., Solomon K.V., De Groot R.,
RA Kuo A., Mondo S.J., Salamov A.A., Labutti K., Zhao Z., Chiniquy J.,
RA Barry K., Brewer H.M., Purvine S.O., Wright A.T., Boxma B., Van Alen T.,
RA Hackstein J.H., Baker S.E., Grigoriev I.V., O'Malley M.A.;
RT "A Parts List for Fungal Cellulosomes Revealed by Comparative Genomics.";
RL Submitted (AUG-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: tRNA modification; 5-methoxycarbonylmethyl-2-thiouridine-tRNA
CC biosynthesis. {ECO:0000256|ARBA:ARBA00005043}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the WD repeat ELP2 family.
CC {ECO:0000256|ARBA:ARBA00005881}.
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DR EMBL; KZ150749; OUM70503.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y3NZ07; -.
DR STRING; 73868.A0A1Y3NZ07; -.
DR OMA; ENFRHIS; -.
DR UniPathway; UPA00988; -.
DR Proteomes; UP000195826; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0033588; C:elongator holoenzyme complex; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 4.
DR InterPro; IPR037289; Elp2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR44111; ELONGATOR COMPLEX PROTEIN 2; 1.
DR PANTHER; PTHR44111:SF1; ELONGATOR COMPLEX PROTEIN 2; 1.
DR Pfam; PF00400; WD40; 7.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 8.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 6.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000195826};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT REPEAT 53..98
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 102..139
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 208..254
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 419..450
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 588..620
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 636..677
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 778 AA; 87933 MW; 4366BB7EBA00D7E1 CRC64;
MVSFKPKFIS IGANKVTNGA DWNIYGQIAF AAGNFVALFK PFDKNNSGIT STLPGHKDVV
NGVKFLKFGP HQGKVLVSYS QDKTIRIWKL NKENNWVTAC ILKGHKGNIE NIALIADKAN
PNNILIASSS TDSIIKIWNY VLKDLDNIEE IKESIQTIDT SYKKFFTLSL DLSYLPNSNK
IIMAAGGTNL AIDIYILNSN NFDKILSLQG HTDWVRCLEF AKMTNDPNTL ILASSSQDKY
IRIWKISESL DVKSSNTEGL LNNSNFSSKD ILESFSLNNI NADGFQLSTK AHIFEVNEDD
STKKNFTLLL DAVLMGHDNW VYSVKWKRIQ SDSFEPLYEM QLLSASADNT MILWIPDAEL
NGVWNSTIRV GELGSESNGF IGGLFSPDGN AILSHSYTGA FYIWKKTQES NIWEPQVTIT
GHFGPVEQVR WDPTSSYIIS VSKDQTARLF MPHEKNNNWY EVARPQIHGY DMRCLTFLNN
HKYICGADEK VLRVIQAPLS FVKTLNKFKG IDSMEIDDNQ EEERPLSAAL PALGLSNKAV
SQPDTNAQLL EGIDSPPIEN YLCNYSLWPE IQKLLWDTKT WKEYPKTLPG HTLTITALAF
SNDDEYLISV SRDRSWSLYK KTGNEDEPYK FVTHNTKAHA RIIWDCSWTP DNKYFATASR
DKTLKIWKID DEEPVNKWIV STLKLKESVT SIQFLNIDAP YYVLALGLES GKISILKCEK
NDLKLNGSTW TEFGTIDEND MHVASVKSIE WKAIQDNKLS FVTCSTDGSV RIFEGLLE
//