ID A0A1Y4AF62_9ACTN Unreviewed; 339 AA.
AC A0A1Y4AF62;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=LacI family transcriptional regulator {ECO:0000313|EMBL:OUO20867.1};
GN ORFNames=B5F89_04890 {ECO:0000313|EMBL:OUO20867.1};
OS Collinsella sp. An307.
OC Bacteria; Actinomycetota; Coriobacteriia; Coriobacteriales;
OC Coriobacteriaceae; Collinsella.
OX NCBI_TaxID=1965630 {ECO:0000313|EMBL:OUO20867.1, ECO:0000313|Proteomes:UP000196349};
RN [1] {ECO:0000313|Proteomes:UP000196349}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=An307 {ECO:0000313|Proteomes:UP000196349};
RA Medvecky M., Cejkova D., Polansky O., Karasova D., Kubasova T., Cizek A.,
RA Rychlik I.;
RT "Function of individual gut microbiota members based on whole genome
RT sequencing of pure cultures obtained from chicken caecum.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUO20867.1}.
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DR EMBL; NFIP01000004; OUO20867.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y4AF62; -.
DR OrthoDB; 37081at2; -.
DR Proteomes; UP000196349; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06267; PBP1_LacI_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF152; HTH-TYPE TRANSCRIPTIONAL REGULATOR EBGR-RELATED; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000196349};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 4..59
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 339 AA; 37662 MW; A76C34E836BF00A4 CRC64;
MPKVTLKEIA REAGLSVSTV SLVLNNRPCR ITEENRRRIK AIAAAKHYVP NQIARSLVTQ
RSNTLGLIVP NIESRFFSRL AKNLEQRCRE RGFALFITTS DDLAVNDIEL LSTLVNRGVE
GLFIVLGNQT EGGEDLPERI AALPVPYVMI DRVLDDAACD KVLFDNELGG YMATRHLLEH
GHRRIACIVN ASRSNTGRHR LEGYRRALDE FDVPFDESLV FDSDYYIPDA YEAAAGITAT
DATAVFASSD NIALGLLKRL YEEGCRVPRD YSVVSYDNSA ADSLFEPALT AIDQDVAVLA
EEALALIVRR LDAAAPEDVE AETRLLEPRL VERDSVQQR
//
