ID A0A1Y4C5V4_9FIRM Unreviewed; 322 AA.
AC A0A1Y4C5V4;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:OUO38711.1};
GN ORFNames=B5F88_11110 {ECO:0000313|EMBL:OUO38711.1};
OS Flavonifractor sp. An306.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Flavonifractor.
OX NCBI_TaxID=1965629 {ECO:0000313|EMBL:OUO38711.1, ECO:0000313|Proteomes:UP000195472};
RN [1] {ECO:0000313|Proteomes:UP000195472}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=An306 {ECO:0000313|Proteomes:UP000195472};
RA Medvecky M., Cejkova D., Polansky O., Karasova D., Kubasova T., Cizek A.,
RA Rychlik I.;
RT "Function of individual gut microbiota members based on whole genome
RT sequencing of pure cultures obtained from chicken caecum.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUO38711.1}.
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DR EMBL; NFIQ01000040; OUO38711.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y4C5V4; -.
DR OrthoDB; 369222at2; -.
DR Proteomes; UP000195472; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06291; PBP1_Qymf-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF95; RIBOSE OPERON REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000195472};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..52
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 322 AA; 35280 MW; 33D55F13ED7D1631 CRC64;
MKDVAQEAGV ALGTVSKVFN NGSVGEDYRR RVLAAAERLG YQVNSYARGL KTNRTYTVAV
VLPNIINPFF ALLAQNLCQA LTKRGYRMFL SITDFDPAAE QRYIHMAQQN QVDGIIGLTY
NPDLQVADKV PFVSFDRYVS PDVPCVASDN FGGGQLAAKK LVELGCGRLL FLRIGSPVAG
ESEKRRNGFE TFCRGAGVEY DTLYLCDSDG YEPFRTFLQT HIHQGHLDYD GIFCCTDVLT
LEIQKMLSEL GIHAPRDVQL IGFDGTAIHM GRAPECSTIV QPIPLLAETC VDILLKGDKS
DLPSLICLPV SYAPGGTTQD PV
//