ID A0A1Y4I5T8_9BACT Unreviewed; 485 AA.
AC A0A1Y4I5T8;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE SubName: Full=Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:OUP12162.1};
GN ORFNames=B5F34_00705 {ECO:0000313|EMBL:OUP12162.1};
OS Mediterranea sp. An20.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Mediterranea.
OX NCBI_TaxID=1965586 {ECO:0000313|EMBL:OUP12162.1, ECO:0000313|Proteomes:UP000196631};
RN [1] {ECO:0000313|Proteomes:UP000196631}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=An20 {ECO:0000313|Proteomes:UP000196631};
RA Medvecky M., Cejkova D., Polansky O., Karasova D., Kubasova T., Cizek A.,
RA Rychlik I.;
RT "Function of individual gut microbiota members based on whole genome
RT sequencing of pure cultures obtained from chicken caecum.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the polysaccharide synthase family.
CC {ECO:0000256|ARBA:ARBA00007430}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUP12162.1}.
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DR EMBL; NFJV01000001; OUP12162.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y4I5T8; -.
DR OrthoDB; 9770347at2; -.
DR Proteomes; UP000196631; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR CDD; cd13127; MATE_tuaB_like; 1.
DR InterPro; IPR029303; Polysacc_synt_C.
DR PANTHER; PTHR30250:SF10; LIPOPOLYSACCHARIDE BIOSYNTHESIS PROTEIN WZXC-RELATED; 1.
DR PANTHER; PTHR30250; PST FAMILY PREDICTED COLANIC ACID TRANSPORTER; 1.
DR Pfam; PF13440; Polysacc_synt_3; 1.
DR Pfam; PF14667; Polysacc_synt_C; 1.
PE 3: Inferred from homology;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000196631};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 21..42
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 48..72
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 84..107
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 119..139
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 151..169
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 175..193
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 295..317
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 329..346
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 358..382
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 394..412
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 419..438
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 444..466
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 329..467
FT /note="Polysaccharide biosynthesis protein C-terminal"
FT /evidence="ECO:0000259|Pfam:PF14667"
SQ SEQUENCE 485 AA; 53912 MW; 7DD3594D8A90B902 CRC64;
MKNEKNSLKE KTARGLFWGG ISNGVQQLLN LLFGIFLARL LTPDDYGMVG MLSIFSLIAS
TLQESGFTAA LANKKDAGQR DYNAVFWFST LMGATLYVIL FFCAPLIADF YHTPELTPLA
RYSFLGFLIS STGVAHYAVM FRQLKVKQNA ILTLTSLTLS GVTGVAMAWC GMAYWGIATQ
SLVYVAGVTA LRWHYSGWRP TWKVDFRPLG GMVAFSSRLL VTNIFQHINY NLLSVVLGRF
YAVREVGFFN QSNKWNYMGF SVIQGMVQGV AQPVLRQVDE DPGRQLRVFR KMLRFVAFVS
FPCLLGLAIV APELITMAIT DKWARSADLL QMLCVGSAFI PVQNLYSNLV VSHGRSDTFM
WSVIVQGVVQ VGVALACCRY GMEAMVACYT GVNILWTFVW HCLAGPGIGL RLRDALRDVL
PFLLIAAAVM GVTGLTVPYL TDNIYASLVA KVVMAAVLYT GIMAACRVQT FRESWAYFHR
KKQEE
//
