ID A0A1Y4IX88_9FIRM Unreviewed; 276 AA.
AC A0A1Y4IX88;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=MerR family transcriptional regulator {ECO:0000313|EMBL:OUP24066.1};
GN ORFNames=B5F28_08365 {ECO:0000313|EMBL:OUP24066.1};
OS Gemmiger sp. An194.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Gemmiger.
OX NCBI_TaxID=1965582 {ECO:0000313|EMBL:OUP24066.1, ECO:0000313|Proteomes:UP000196090};
RN [1] {ECO:0000313|Proteomes:UP000196090}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=An194 {ECO:0000313|Proteomes:UP000196090};
RA Medvecky M., Cejkova D., Polansky O., Karasova D., Kubasova T., Cizek A.,
RA Rychlik I.;
RT "Function of individual gut microbiota members based on whole genome
RT sequencing of pure cultures obtained from chicken caecum.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUP24066.1}.
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DR EMBL; NFKA01000011; OUP24066.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y4IX88; -.
DR OrthoDB; 9773308at2; -.
DR Proteomes; UP000196090; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd01107; HTH_BmrR; 1.
DR Gene3D; 1.10.1660.10; -; 1.
DR Gene3D; 3.20.80.10; Regulatory factor, effector binding domain; 1.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR029442; GyrI-like.
DR InterPro; IPR000551; MerR-type_HTH_dom.
DR InterPro; IPR047057; MerR_fam.
DR InterPro; IPR011256; Reg_factor_effector_dom_sf.
DR PANTHER; PTHR30204:SF96; MERR FAMILY REGULATORY PROTEIN; 1.
DR PANTHER; PTHR30204; REDOX-CYCLING DRUG-SENSING TRANSCRIPTIONAL ACTIVATOR SOXR; 1.
DR Pfam; PF06445; GyrI-like; 1.
DR Pfam; PF00376; MerR; 1.
DR SMART; SM00422; HTH_MERR; 1.
DR SUPFAM; SSF55136; Probable bacterial effector-binding domain; 1.
DR SUPFAM; SSF46955; Putative DNA-binding domain; 1.
DR PROSITE; PS00552; HTH_MERR_1; 1.
DR PROSITE; PS50937; HTH_MERR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000196090}.
FT DOMAIN 6..75
FT /note="HTH merR-type"
FT /evidence="ECO:0000259|PROSITE:PS50937"
SQ SEQUENCE 276 AA; 32241 MW; 06492A4121AC14B1 CRC64;
MAKEQLYTIG EVSKLCNVSA KALRFYDKIG MISPDKISES GYRYYSLDTI LSIPIVKYYK
QMGFRLEEMQ GLVNGENYYV VEGSFHNKIN ELWEQEHAIH NSYIAVKEWY ELIQEAKAVR
LNKAQEVGMR YVAAEDMCCL DQDFEYHYMD SIINIPWVNY LDSVKNEISG PVILEFDSWK
DKMEGHATRA RIMQKPIHRC ACGTNEIRFG GFMAATLYHV GPLERIEESY TKLVEWAKAK
GVKLGQRVFE RYVVDYWTTR NREEFVTELI IPLEEG
//
