ID A0A1Y4K9X7_9ACTN Unreviewed; 650 AA.
AC A0A1Y4K9X7;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=HTH luxR-type domain-containing protein {ECO:0000259|SMART:SM00421};
GN ORFNames=B5F23_07035 {ECO:0000313|EMBL:OUP38322.1};
OS Olsenella sp. An188.
OC Bacteria; Actinomycetota; Coriobacteriia; Coriobacteriales; Atopobiaceae;
OC Olsenella.
OX NCBI_TaxID=1965579 {ECO:0000313|EMBL:OUP38322.1, ECO:0000313|Proteomes:UP000196278};
RN [1] {ECO:0000313|Proteomes:UP000196278}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=An188 {ECO:0000313|Proteomes:UP000196278};
RA Medvecky M., Cejkova D., Polansky O., Karasova D., Kubasova T., Cizek A.,
RA Rychlik I.;
RT "Function of individual gut microbiota members based on whole genome
RT sequencing of pure cultures obtained from chicken caecum.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUP38322.1}.
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DR EMBL; NFKF01000005; OUP38322.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y4K9X7; -.
DR OrthoDB; 9808843at2; -.
DR Proteomes; UP000196278; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR039420; WalR-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR43214; TWO-COMPONENT RESPONSE REGULATOR; 1.
DR Pfam; PF00196; GerE; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR SMART; SM00421; HTH_LUXR; 2.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 43..63
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 75..97
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 117..140
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 152..170
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 176..194
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 206..224
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 244..269
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 406..425
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 464..482
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 503..524
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 544..561
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 300..357
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|SMART:SM00421"
FT DOMAIN 588..645
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|SMART:SM00421"
SQ SEQUENCE 650 AA; 69065 MW; 3ED680272439A7EC CRC64;
MGGRDGHART LWCLWGALLG AMPCVLRSPV VSLFSVSALV APLQFQVEPL AAALSAVVLV
EVLSEGRASK RAERVLRMAC PVVACVTVPL IVLSEVAWLP MRLGDYSLLA WQPVFELVGN
VALTLSLVGW VLFGTCLGDA FAPSGVMERR SLMLGLLLGG VFVPMLLLVV SLGLPAWGGP
VLCVAACILS WRVCRQISLT LGGISGFLDC ALVLLGGLYA SSALCRALSD VLLYHPVNFP
DADPLGSACI VMLGVASVAL VLCVAAAYVR KRWCAGEDLS PHVQPHEAAA CDLLPLLPGG
DSLSARQRDV IVLRLKGMKG AEVAKELGIG RGTVSTFQRR ALDALGFESL DQLSFHLETM
RDKNVSEGTA FHGEGDMRPV VLKALPVTLT LLPLVATAPL PYQETALLIV GATLVVVALA
QMSTLDERLW GRCPVGSGAR SFVLTCACAQ SLGCLISVNY GGLPWGFVNV ALSEFLICFT
ALREGIAQEF RFRPDSQTHQ LRLASCLGIG LRLLCVRCPA FLLLVGSGLS SHRAALLNTG
LQEGFFVGAV LGAGFSFISS VRQIHKRTKI IGEGPLKREA GLLKSLEDYG LTETEARVVV
LVFFGMSRSQ VAHHLCIAQG TVNGAKATAY RKLGVHSSIE LRKLLKKSAG
//
