ID A0A1Y4N8B3_9FIRM Unreviewed; 1010 AA.
AC A0A1Y4N8B3;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=Nuclease SbcCD subunit C {ECO:0000256|ARBA:ARBA00013368};
GN ORFNames=B5F09_06940 {ECO:0000313|EMBL:OUP77095.1};
OS Erysipelatoclostridium sp. An173.
OC Bacteria; Bacillota; Erysipelotrichia; Erysipelotrichales;
OC Coprobacillaceae; Thomasclavelia.
OX NCBI_TaxID=1965571 {ECO:0000313|EMBL:OUP77095.1, ECO:0000313|Proteomes:UP000196550};
RN [1] {ECO:0000313|Proteomes:UP000196550}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=An173 {ECO:0000313|Proteomes:UP000196550};
RA Medvecky M., Cejkova D., Polansky O., Karasova D., Kubasova T., Cizek A.,
RA Rychlik I.;
RT "Function of individual gut microbiota members based on whole genome
RT sequencing of pure cultures obtained from chicken caecum.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Heterodimer of SbcC and SbcD. {ECO:0000256|ARBA:ARBA00011322}.
CC -!- SIMILARITY: Belongs to the SMC family. SbcC subfamily.
CC {ECO:0000256|ARBA:ARBA00006930}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUP77095.1}.
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DR EMBL; NFKR01000012; OUP77095.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y4N8B3; -.
DR Proteomes; UP000196550; Unassembled WGS sequence.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006302; P:double-strand break repair; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038729; Rad50/SbcC_AAA.
DR PANTHER; PTHR32114; ABC TRANSPORTER ABCH.3; 1.
DR PANTHER; PTHR32114:SF2; ABC TRANSPORTER ABCH.3; 1.
DR Pfam; PF13476; AAA_23; 1.
DR Pfam; PF13558; SbcC_Walker_B; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW Exonuclease {ECO:0000313|EMBL:OUP77095.1};
KW Hydrolase {ECO:0000313|EMBL:OUP77095.1};
KW Nuclease {ECO:0000313|EMBL:OUP77095.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000196550}.
FT DOMAIN 5..248
FT /note="Rad50/SbcC-type AAA"
FT /evidence="ECO:0000259|Pfam:PF13476"
FT COILED 181..405
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 672..709
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 745..801
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1010 AA; 118656 MW; D0E3EDE33369A6B5 CRC64;
MLPKKLTMSA FGPYLQTVNI DFENFINNGL FLITGPTGAG KTMIFDAIMF ALYGVSSGSE
RSSEQFRSDL AGNDTPTYVE LEFVLHQANY KVRRSPKYYL TNRKTPKMPS AILTMPDGKM
IEGVKEVNLK IKELLGIDDK QFKQIVMIAQ GEFTRLIYAT SEDREKVLRN LFKTDNLGLL
QERLKDEVRE YKSKYDLLFN QRNLLYQNLN LENNEINLEE YIKEYQDKII KEEKQYRQVQ
NEYNKKNQEL NLYRLINQRF EQLEQLKNKF EKIEKQKVEY NSLKETITKL KKATKLQNSY
NQVKNTKINL DKLTIQLDDL QKELSNKQSV LNTQLEKYQQ IPNYRNQLAN EQIEYEKLLE
TKKRFTKYQK DILEKEMVEK KWQLLKDKNI ELENKLSKYN KLIEKDTLTI SRLDSLKSKY
ELTNQEYEKI HQHKLEIHTL NSEYDNYVLS DYSCCELREQ YQDIEKDYQY EKKVYDDIEH
RYRISQAGIL ASQLQDNQPC PVCGSLKHPH PASIDFEIVD HDDLKRGKQK FDHFSERRNE
IFNELMLKQK ETELMKKHLD EDAKRLGIDD ELGKEVFIKV LGSVNIKERH LLKNAKEISE
EISYLKKLKV SVEKYQNDVG QLSKTVDKNN LLIQEYQAKI NQLIGRNSQN DDLKDFDDSQ
IAKTIKVKQD KITSLTNLIT QTEQNYQQIK EVTIKLNSKQ ESLKKQIDEQ NSNYQKYFPE
YQTKLKQLFE NEEMFLSALK DIDNLEILEN KYQNYLVSRE TLEKQIMQLE KELTNQNKTD
LLEYEKDVKI LKEELDAKAK QLNINQAQFL TIKKTVNDIN TIDKKLSKSY DKYKCYLDLS
EVASGKNQYR ISFERYVLAA YFENILVYAN VLLKRMSQGR YQLYRRDNRS KGAGKQGLDL
DVLDMESGMI RDVKTLSGGE SFKAALSLAL GLSKMIQDYA GGIELNTLFI DEGFGSLDSQ
SLDQAINCLI DLQQDGKLIG IISHVSELKE RIDQKIVLTR INKQTKISIE
//