ID A0A1Y4NKA9_9FIRM Unreviewed; 552 AA.
AC A0A1Y4NKA9;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=GGDEF domain-containing protein {ECO:0000259|PROSITE:PS50887};
GN ORFNames=B5F07_18170 {ECO:0000313|EMBL:OUP81283.1};
OS Lachnoclostridium sp. An169.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=1965569 {ECO:0000313|EMBL:OUP81283.1, ECO:0000313|Proteomes:UP000195962};
RN [1] {ECO:0000313|Proteomes:UP000195962}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=An169 {ECO:0000313|Proteomes:UP000195962};
RA Medvecky M., Cejkova D., Polansky O., Karasova D., Kubasova T., Cizek A.,
RA Rychlik I.;
RT "Function of individual gut microbiota members based on whole genome
RT sequencing of pure cultures obtained from chicken caecum.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUP81283.1}.
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DR EMBL; NFKT01000033; OUP81283.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y4NKA9; -.
DR OrthoDB; 9804955at2; -.
DR Proteomes; UP000195962; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR45138:SF9; DIGUANYLATE CYCLASE DGCM-RELATED; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000195962};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 27..45
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 176..201
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 210..227
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 239..260
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 272..296
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 302..322
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 334..354
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 360..381
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 426..552
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 552 AA; 62144 MW; FFE497541BA52F34 CRC64;
MPYHRAVYIN SKWGKLMLHS DRHLYKYLRY TLIFGLLCII AASLVKSFYL EPVGAITQKK
TFEHLKAAPF TQTVPDNTFS ETCTYHVPVG VYSSPVLAVE PFSNTVQVAL DGREIFSYED
SEKEKGFNIL WIPLPDDAAG KLLTVTCSSA SRNSIEPLIM LGDQNALFIN YLGDNFISAL
VGSASVLMGI ILCAASFLLY LKNRGISQAA LFYLGIFILL TGIWILTDSD ILQFITGRTA
STTLVSFLAF MFMPYFFLLF FQRILEKSPR PLRILGMLML VNAAFVTVCY LFRILILYAT
LLGSHLLLVV VMGFILKISF TEFRRRQSQE LKKILIGIGL LLAGVLAALA AFYIDVAGRW
YPICYSVGIL FFILCLTSAA LDNTYRRMSE HASLKAYKKI AYTDVMTGMN NRSAFTRYEK
DHILPAASAC LVFDINNLKH TNDTFGHLAG DELIIEAAQC ITETFHSAGK CFRTGGDEFV
VILENIQPDG LRRKLQDMKA LLDEKNKSRS PALNLAYGCN YADITGRSVR EMFEKADREM
YDMKKRMKQE EG
//
