GenomeNet

Database: UniProt
Entry: A0A1Y4RG33_9FIRM
LinkDB: A0A1Y4RG33_9FIRM
Original site: A0A1Y4RG33_9FIRM 
ID   A0A1Y4RG33_9FIRM        Unreviewed;       358 AA.
AC   A0A1Y4RG33;
DT   30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT   30-AUG-2017, sequence version 1.
DT   24-JAN-2024, entry version 18.
DE   RecName: Full=Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093};
DE            Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};
GN   Name=prfA {ECO:0000256|HAMAP-Rule:MF_00093};
GN   ORFNames=B5E84_12205 {ECO:0000313|EMBL:OUQ16515.1};
OS   Lachnoclostridium sp. An14.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX   NCBI_TaxID=1965562 {ECO:0000313|EMBL:OUQ16515.1, ECO:0000313|Proteomes:UP000196089};
RN   [1] {ECO:0000313|Proteomes:UP000196089}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=An14 {ECO:0000313|Proteomes:UP000196089};
RA   Medvecky M., Cejkova D., Polansky O., Karasova D., Kubasova T., Cizek A.,
RA   Rychlik I.;
RT   "Function of individual gut microbiota members based on whole genome
RT   sequencing of pure cultures obtained from chicken caecum.";
RL   Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC       translation in response to the peptide chain termination codons UAG and
CC       UAA. {ECO:0000256|ARBA:ARBA00002986, ECO:0000256|HAMAP-Rule:MF_00093}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00093}.
CC   -!- PTM: Methylated by PrmC. Methylation increases the termination
CC       efficiency of RF1. {ECO:0000256|HAMAP-Rule:MF_00093}.
CC   -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC       family. {ECO:0000256|ARBA:ARBA00010835, ECO:0000256|HAMAP-
CC       Rule:MF_00093}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OUQ16515.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; NFLE01000020; OUQ16515.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1Y4RG33; -.
DR   OrthoDB; 9806673at2; -.
DR   Proteomes; UP000196089; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.160.20; -; 1.
DR   Gene3D; 3.30.70.1660; -; 2.
DR   Gene3D; 6.10.140.1950; -; 1.
DR   HAMAP; MF_00093; Rel_fac_1; 1.
DR   InterPro; IPR005139; PCRF.
DR   InterPro; IPR000352; Pep_chain_release_fac_I.
DR   InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR   InterPro; IPR004373; RF-1.
DR   NCBIfam; TIGR00019; prfA; 1.
DR   PANTHER; PTHR43804; LD18447P; 1.
DR   PANTHER; PTHR43804:SF7; LD18447P; 1.
DR   Pfam; PF03462; PCRF; 1.
DR   Pfam; PF00472; RF-1; 1.
DR   SMART; SM00937; PCRF; 1.
DR   SUPFAM; SSF75620; Release factor; 1.
DR   PROSITE; PS00745; RF_PROK_I; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00093};
KW   Methylation {ECO:0000256|ARBA:ARBA00022481, ECO:0000256|HAMAP-
KW   Rule:MF_00093};
KW   Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917, ECO:0000256|HAMAP-
KW   Rule:MF_00093}; Reference proteome {ECO:0000313|Proteomes:UP000196089}.
FT   DOMAIN          226..242
FT                   /note="Prokaryotic-type class I peptide chain release
FT                   factors"
FT                   /evidence="ECO:0000259|PROSITE:PS00745"
FT   COILED          48..101
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   MOD_RES         233
FT                   /note="N5-methylglutamine"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00093"
SQ   SEQUENCE   358 AA;  40762 MW;  5618D49D4A12881B CRC64;
     MFDRLDDILI HYEELMLELN NPSVAEDQNR FRKLMKEQAD LAPIVEAYKA YKQAKQDVED
     SLALLDEESD EEMRELAKEE LADARKRIEE LEKELKILLL PKDPNDDKNI IMEIRAGAGG
     DEAALFASEL YRMYVNYAEH QHWKVEMISV NENGIGGFKE VVCMITGKGA YSKLKYESGV
     HRVQRVPETE SGGRIHTSTA TVAVMPEAEE VDVQIDMNDC RIDVMRASGN GGQCVNTTDS
     AVRLTHIPTG IVIYSQTEKS QLQNKEKAFR LLRSKLYDIE LEKRQNAEAE ERRSQIGTGD
     RSEKIRTYNF PQGRVTEHRI KLTLYKIDSI MNGDIQEIID SLIAADQSAK LAKMNEES
//
DBGET integrated database retrieval system