ID A0A1Y4U107_9FIRM Unreviewed; 958 AA.
AC A0A1Y4U107;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE SubName: Full=Penicillin-binding protein {ECO:0000313|EMBL:OUQ50863.1};
GN ORFNames=B5E62_06985 {ECO:0000313|EMBL:OUQ50863.1};
OS Lachnoclostridium sp. An118.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=1965547 {ECO:0000313|EMBL:OUQ50863.1, ECO:0000313|Proteomes:UP000199786};
RN [1] {ECO:0000313|Proteomes:UP000199786}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=An118 {ECO:0000313|Proteomes:UP000199786};
RA Medvecky M., Cejkova D., Polansky O., Karasova D., Kubasova T., Cizek A.,
RA Rychlik I.;
RT "Function of individual gut microbiota members based on whole genome
RT sequencing of pure cultures obtained from chicken caecum.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUQ50863.1}.
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DR EMBL; NFLQ01000006; OUQ50863.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y4U107; -.
DR OrthoDB; 9757901at2; -.
DR Proteomes; UP000199786; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 2.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF2; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE MRDA; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000199786};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..36
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 60..322
FT /note="Penicillin-binding protein dimerisation"
FT /evidence="ECO:0000259|Pfam:PF03717"
FT DOMAIN 612..931
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
SQ SEQUENCE 958 AA; 105841 MW; ADCCB758A5166332 CRC64;
MWERIKSGIY ELFQRRAVVS IIIFCVMFSI LVGRLFQLQI VNGQSYLEDY TIQIQKTRTI
QGTRGNIYDR NGNLLAYNEL AYSVTIEDNG VYNTTAEKNE ALNEEITRII EIVEGNGDSV
ISDFSIVLDA NNEYQFSMTD ETQRLRFVAD VFGESYIDSL DDEQRNMSAA EIIDYLCTDE
TYGYGIDQDA LDRSQVLKMV NIRYAIGLNS FQKYIPTTVA EDVSDETVAE IMEHLNELQG
VDIAEESLRR YTDSKYFANL IGYTGQISQE EYNALGEEEK EQYDLTDTVG KSGLEQVLDS
TLQGDKGEVK LYVNSVGRVI DTVGETEPKA GNDVYLTIDA NLQKAAYDIL EQELAGILLS
RMQDILDYDR TQSEDAADVI VASGDAYNAF IDNDIVDMSH FSAEGAGAAE QSVYGKFAPY
KEQVLSQLTS IMQDGNASAY RDMSREWQAY LSHVVNEVLT GENGVIMSDA IDTDDETYQQ
WRNEETINIY TYLNYAISQN WVDASKLQAY LSSEGNYSDS SEVYSAMISY VTDRLSSSTD
FDKLIYQYMI KAGTVTGREL CMILYEQGVL PMDETQYNNL ASGATGAYDF LRSKIQSLEI
TPGQLGLEPC RGSVVITDTD SGDVLACVSY PGYDNNRLAN TMDSEYYNEL NTSTSQPFYN
SATQETTAPG STYKPLVAVA GLTEGAIDTS TTVYCDGNFD VISPEVHCWV YPAGHGTMNV
VSGITNSCNE FFNNIGYQLG MQTDGTYSSE YGLERLAKYA ELFGLNETSG LEIPEMDPKV
SDEDSVRSAM GQGTNNYTTS QLARYITAVA NKGTLYELTL LDRVENVDGE VVEEFQNGEA
RTIEGVSSST WDAVHAGMEG VVQNSSVFTA INASSMSVSG KTGTAQQSTT HADHGLFVGF
APSDNPEIAM AIRIANGYSS TYASEVGSNI FQYYYQITDS AQLITGQAAE ITVNTSGD
//