ID A0A1Y4UC39_9BACT Unreviewed; 446 AA.
AC A0A1Y4UC39;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Sigma-54-dependent Fis family transcriptional regulator {ECO:0000313|EMBL:OUQ54515.1};
GN ORFNames=B5E60_01665 {ECO:0000313|EMBL:OUQ54515.1};
OS Alistipes sp. An116.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae;
OC Alistipes.
OX NCBI_TaxID=1965546 {ECO:0000313|EMBL:OUQ54515.1};
RN [1] {ECO:0000313|EMBL:OUQ54515.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=An116 {ECO:0000313|EMBL:OUQ54515.1};
RX PubMed=30064352;
RA Medvecky M., Cejkova D., Polansky O., Karasova D., Kubasova T., Cizek A.,
RA Rychlik I.;
RT "Whole genome sequencing and function prediction of 133 gut anaerobes
RT isolated from chicken caecum in pure cultures.";
RL BMC Genomics 19:0-561(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUQ54515.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; NFLR01000002; OUQ54515.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y4UC39; -.
DR OrthoDB; 9810703at2; -.
DR Proteomes; UP000195395; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071:SF120; L-LYSINE AMINOMUTASE REGULATOR; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 13..242
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT REGION 357..404
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 390..404
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 446 AA; 48991 MW; 79634E783719423E CRC64;
MTEITTVKQR FGIIGTSPLL DRALEVALRV APTDLTVLVT GESGVGKEFF PQVIHAYSAR
KHNKYIAVNC AAIPEGTIDS ELFGHEKGAF TGAVEARKGY FEEADGGTIF LDEVAELPHS
TQARLLRVLQ TGEFIRVGSS KVQKTNVRVV AATNVNLPEA ISAGRFREDL YYRLATVPIT
VPALRERPDD IPLLFRKFAA DVAVQYRMPA VTLDDAARDM LKSYYWRGNI RQLKNVAEQI
SAIEQVRVIT PEVLVKYLPP QEGTSTMAAA GAPRMDDQTM STERELLYKV LFDLRADIND
LKRMMAELLR NGGVAASEPV RDIRALLPTT TPGRYVPAVQ TPGAYGHQVA PGYGPTAGQP
CGPSTGQPCG PTVGAADAQP SAPVYAESEE VTDEPPREKT KADMQREQII RALKHNNGRR
REAAAELFMS ERTLYRKIKE LGIEDV
//
