GenomeNet

Database: UniProt
Entry: A0A1Y5ECR2_9PROT
LinkDB: A0A1Y5ECR2_9PROT
Original site: A0A1Y5ECR2_9PROT 
ID   A0A1Y5ECR2_9PROT        Unreviewed;       560 AA.
AC   A0A1Y5ECR2;
DT   30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT   30-AUG-2017, sequence version 1.
DT   10-APR-2019, entry version 6.
DE   RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN   ORFNames=A9Q83_07650 {ECO:0000313|EMBL:OUR78517.1};
OS   Alphaproteobacteria bacterium 46_93_T64.
OC   Bacteria; Proteobacteria; Alphaproteobacteria.
OX   NCBI_TaxID=1856292 {ECO:0000313|EMBL:OUR78517.1, ECO:0000313|Proteomes:UP000196525};
RN   [1] {ECO:0000313|Proteomes:UP000196525}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Hu P., Dubinsky E.A., Probst A.J., Wang J., Sieber C.M.K., Tom L.M.,
RA   Gardinali P., Banfield J.F., Atlas R.M., Andersen G.L.;
RT   "Simulation of Deepwater Horizon oil plume reveals substrate
RT   specialization within a complex community of hydrocarbon-degraders.";
RL   Proc. Natl. Acad. Sci. U.S.A. 0:0-0(2017).
CC   -!- FUNCTION: Binds mRNA; thus facilitating recognition of the
CC       initiation point. It is needed to translate mRNA with a short
CC       Shine-Dalgarno (SD) purine-rich sequence.
CC       {ECO:0000256|PIRNR:PIRNR002111}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC       {ECO:0000256|PIRNR:PIRNR002111}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:OUR78517.1}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; MAAN01000018; OUR78517.1; -; Genomic_DNA.
DR   Proteomes; UP000196525; Unassembled WGS sequence.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR000110; Ribosomal_S1.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   Pfam; PF00575; S1; 6.
DR   PIRSF; PIRSF002111; RpsA; 1.
DR   SMART; SM00316; S1; 6.
DR   SUPFAM; SSF50249; SSF50249; 6.
DR   TIGRFAMs; TIGR00717; rpsA; 1.
DR   PROSITE; PS50126; S1; 6.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000196525};
KW   Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW   Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW   ECO:0000313|EMBL:OUR78517.1};
KW   RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT   DOMAIN       23     89       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      107    173       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      194    262       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      279    349       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      366    436       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      452    521       S1 motif. {ECO:0000259|PROSITE:PS50126}.
SQ   SEQUENCE   560 AA;  60924 MW;  0CDE54DE49A58A38 CRC64;
     MPAFEDFAAM LEESYGASNS LEGTVIKGTV VNIEKDLAII DVGLKSEGRV PLKEFSAPGQ
     DSDLKIGDTV EVFLERIENS AGEAVLSRDK ARREEAWEKL EVAFGANERV DGVIFGRVKG
     GFTVDLSGAV AFLPGSQVDV RPVRDIAPLK GIPQPFQILK MDRRRGNIVV SRRAVLEESR
     AEARAELIGT LEEGQTLEGV VKNITDYGAF VDLGGVDGLL HVTDIAWRRV NHPTEALTIG
     ETVKVQVIRL NKETQRISLG MKQLQTDPWD ALEAKYPLNA KFSGRVTNIT DYGAFVELEP
     GVEGLVHVSE MSWTKKNVHP GKIVSTSQEV EVMVLEVDES RRRISLGLKQ CLDNPWESFA
     ASTPVGTEIK GDVKNITEFG LFIGLENDVD GMVHMSDIDW SEPGEKAIQS YSKGDEVSAK
     VLDIDIEKER ISLGIKQMSE DPFAGAAEMK KGAIVTCTVT AIQDAGLDVE ISEGVTGFIR
     KGDLSRDRAE QRSDRFAVGD KLDARITSID NKTRKVTLSI KAKEVAEEKE AVAQYGSSDA
     GASLGDILGA AMRKAEGSDD
//
DBGET integrated database retrieval system