ID A0A1Y5JXH9_9BACL Unreviewed; 743 AA.
AC A0A1Y5JXH9;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=HTH araC/xylS-type domain-containing protein {ECO:0000259|PROSITE:PS01124};
GN ORFNames=B1748_28215 {ECO:0000313|EMBL:OUS70632.1};
OS Paenibacillus sp. MY03.
OC Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX NCBI_TaxID=302980 {ECO:0000313|EMBL:OUS70632.1, ECO:0000313|Proteomes:UP000195591};
RN [1] {ECO:0000313|EMBL:OUS70632.1, ECO:0000313|Proteomes:UP000195591}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MY03 {ECO:0000313|EMBL:OUS70632.1,
RC ECO:0000313|Proteomes:UP000195591};
RA Liu H., Cheng Y., Gu J.Y., Han W.J.;
RT "Draft genome of a polysaccharide-degrading bacterium Paenibacillus sp.
RT MY03.";
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUS70632.1}.
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DR EMBL; MXQD01000046; OUS70632.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y5JXH9; -.
DR OrthoDB; 1975037at2; -.
DR Proteomes; UP000195591; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR041522; CdaR_GGDEF.
DR InterPro; IPR033479; dCache_1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43280:SF2; BIFUNCTIONAL TRANSCRIPTIONAL ACTIVATOR/DNA REPAIR ENZYME ADAA; 1.
DR Pfam; PF02743; dCache_1; 1.
DR Pfam; PF17853; GGDEF_2; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Reference proteome {ECO:0000313|Proteomes:UP000195591};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT DOMAIN 640..738
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 743 AA; 84793 MW; 530CC281602D523D CRC64;
MMRPTRNLHY SKNLTFKHRL MLIVLLLSVI PVFVLGMFSS NNAASIVQQE VDRNHLMVLR
QIQYQFDQFM KSMDRASFQI ANNSIVEKSV EIGPINNDLG YTFGTIDVIK KARSMQEIHF
DVSLVYMEEA QVYSTRYGFV DLTDFPFRDL LKSVGVRFNS MVVVPPETGQ RAHELLMLRP
VPAFYSDRPD GILVFHIDPS LLTGILEQVE LGHNGKILIT DEQGAVVFSQ NAAEIGSRIS
ATLEPYMFRG KAGVVSAESS REEAGKVSMN GEDYLSASIH SSYNNWSYIA ITPYTELTKK
AGEVRRFTLG LAGSLVGLAI LMAFLGSNRL YSPIQRMQQK LQGEFREQLP YLRDSIFLQL
IRGEMSDNKI RGKTERYGLL LKGSRFYVCL VEMDDFAQFK QKYKENDRSL MIYALRKMLE
ELCENDFSCV TVSPLPNQVA VLIGTKDASE RADEAVRRKA MEFRSNSQNH FHLPVTVALS
RACRDYTGIS EAYQDASELI GYRMLLGSDE LIVQDSVRMP LGTTGYSLIE LKKKILSAMA
KGDESEARSS LSALIEAIPQ HMHNVESVLG TFAYLIGEFD QLVREWSDGG GELDTKELYK
QLLAMSSLGE TERWFADTVF PLVTNALQDA NIPKRTKLIQ QVLQYIHLHY DTDLGLQHVA
DTFQITPPQL SRLFREERNE SFSDYVLRYR IEKAKEWLAH TEMPIREIAE RLRYASVQNF
TRIFKQMTND PPGYYRKKSR LDE
//