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Database: UniProt
Entry: A0A1Y5JXH9_9BACL
LinkDB: A0A1Y5JXH9_9BACL
Original site: A0A1Y5JXH9_9BACL 
ID   A0A1Y5JXH9_9BACL        Unreviewed;       743 AA.
AC   A0A1Y5JXH9;
DT   30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT   30-AUG-2017, sequence version 1.
DT   24-JAN-2024, entry version 26.
DE   RecName: Full=HTH araC/xylS-type domain-containing protein {ECO:0000259|PROSITE:PS01124};
GN   ORFNames=B1748_28215 {ECO:0000313|EMBL:OUS70632.1};
OS   Paenibacillus sp. MY03.
OC   Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX   NCBI_TaxID=302980 {ECO:0000313|EMBL:OUS70632.1, ECO:0000313|Proteomes:UP000195591};
RN   [1] {ECO:0000313|EMBL:OUS70632.1, ECO:0000313|Proteomes:UP000195591}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MY03 {ECO:0000313|EMBL:OUS70632.1,
RC   ECO:0000313|Proteomes:UP000195591};
RA   Liu H., Cheng Y., Gu J.Y., Han W.J.;
RT   "Draft genome of a polysaccharide-degrading bacterium Paenibacillus sp.
RT   MY03.";
RL   Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OUS70632.1}.
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DR   EMBL; MXQD01000046; OUS70632.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1Y5JXH9; -.
DR   OrthoDB; 1975037at2; -.
DR   Proteomes; UP000195591; Unassembled WGS sequence.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR   Gene3D; 3.30.450.20; PAS domain; 1.
DR   InterPro; IPR041522; CdaR_GGDEF.
DR   InterPro; IPR033479; dCache_1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR43280:SF2; BIFUNCTIONAL TRANSCRIPTIONAL ACTIVATOR/DNA REPAIR ENZYME ADAA; 1.
DR   Pfam; PF02743; dCache_1; 1.
DR   Pfam; PF17853; GGDEF_2; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 2.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136};
KW   Reference proteome {ECO:0000313|Proteomes:UP000195591};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT   DOMAIN          640..738
FT                   /note="HTH araC/xylS-type"
FT                   /evidence="ECO:0000259|PROSITE:PS01124"
SQ   SEQUENCE   743 AA;  84793 MW;  530CC281602D523D CRC64;
     MMRPTRNLHY SKNLTFKHRL MLIVLLLSVI PVFVLGMFSS NNAASIVQQE VDRNHLMVLR
     QIQYQFDQFM KSMDRASFQI ANNSIVEKSV EIGPINNDLG YTFGTIDVIK KARSMQEIHF
     DVSLVYMEEA QVYSTRYGFV DLTDFPFRDL LKSVGVRFNS MVVVPPETGQ RAHELLMLRP
     VPAFYSDRPD GILVFHIDPS LLTGILEQVE LGHNGKILIT DEQGAVVFSQ NAAEIGSRIS
     ATLEPYMFRG KAGVVSAESS REEAGKVSMN GEDYLSASIH SSYNNWSYIA ITPYTELTKK
     AGEVRRFTLG LAGSLVGLAI LMAFLGSNRL YSPIQRMQQK LQGEFREQLP YLRDSIFLQL
     IRGEMSDNKI RGKTERYGLL LKGSRFYVCL VEMDDFAQFK QKYKENDRSL MIYALRKMLE
     ELCENDFSCV TVSPLPNQVA VLIGTKDASE RADEAVRRKA MEFRSNSQNH FHLPVTVALS
     RACRDYTGIS EAYQDASELI GYRMLLGSDE LIVQDSVRMP LGTTGYSLIE LKKKILSAMA
     KGDESEARSS LSALIEAIPQ HMHNVESVLG TFAYLIGEFD QLVREWSDGG GELDTKELYK
     QLLAMSSLGE TERWFADTVF PLVTNALQDA NIPKRTKLIQ QVLQYIHLHY DTDLGLQHVA
     DTFQITPPQL SRLFREERNE SFSDYVLRYR IEKAKEWLAH TEMPIREIAE RLRYASVQNF
     TRIFKQMTND PPGYYRKKSR LDE
//
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