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Database: UniProt
Entry: A0A1Y5SQ14_9RHOB
LinkDB: A0A1Y5SQ14_9RHOB
Original site: A0A1Y5SQ14_9RHOB 
ID   A0A1Y5SQ14_9RHOB        Unreviewed;       555 AA.
AC   A0A1Y5SQ14;
DT   30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT   30-AUG-2017, sequence version 1.
DT   27-MAR-2024, entry version 19.
DE   SubName: Full=Ribonuclease J 1 {ECO:0000313|EMBL:SLN44485.1};
DE            EC=3.1.-.- {ECO:0000313|EMBL:SLN44485.1};
GN   Name=rnjA {ECO:0000313|EMBL:SLN44485.1};
GN   ORFNames=PSA7680_02259 {ECO:0000313|EMBL:SLN44485.1};
OS   Pseudoruegeria aquimaris.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Roseobacteraceae; Pseudoruegeria.
OX   NCBI_TaxID=393663 {ECO:0000313|EMBL:SLN44485.1, ECO:0000313|Proteomes:UP000193409};
RN   [1] {ECO:0000313|EMBL:SLN44485.1, ECO:0000313|Proteomes:UP000193409}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CECT 7680 {ECO:0000313|EMBL:SLN44485.1,
RC   ECO:0000313|Proteomes:UP000193409};
RA   Afonso C.L., Miller P.J., Scott M.A., Spackman E., Goraichik I.,
RA   Dimitrov K.M., Suarez D.L., Swayne D.E.;
RL   Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; FWFQ01000015; SLN44485.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1Y5SQ14; -.
DR   OrthoDB; 9770211at2; -.
DR   Proteomes; UP000193409; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   CDD; cd07714; RNaseJ_MBL-fold; 1.
DR   Gene3D; 3.10.20.580; -; 1.
DR   Gene3D; 3.40.50.10710; Metallo-hydrolase/oxidoreductase; 1.
DR   Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR   InterPro; IPR001279; Metallo-B-lactamas.
DR   InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR   InterPro; IPR011108; RMMBL.
DR   InterPro; IPR042173; RNase_J_2.
DR   InterPro; IPR041636; RNase_J_C.
DR   PANTHER; PTHR43694; RIBONUCLEASE J; 1.
DR   PANTHER; PTHR43694:SF1; RIBONUCLEASE J; 1.
DR   Pfam; PF00753; Lactamase_B; 1.
DR   Pfam; PF07521; RMMBL; 1.
DR   Pfam; PF17770; RNase_J_C; 1.
DR   SMART; SM00849; Lactamase_B; 1.
DR   SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
PE   4: Predicted;
KW   Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:SLN44485.1};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW   Reference proteome {ECO:0000313|Proteomes:UP000193409};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          18..206
FT                   /note="Metallo-beta-lactamase"
FT                   /evidence="ECO:0000259|SMART:SM00849"
SQ   SEQUENCE   555 AA;  60017 MW;  C430A3354B79A822 CRC64;
     MSDDRLIYLP LGGAGEIGMN CYVYGYGPKG KERYILVDLG VTFPDMDSTP GVDLILPDIS
     WIAERADRLE AIFITHAHED HVGGVGHLWQ RLGKPVYARS FTAWHARRKM EDAGQPADEV
     RTASAFPEMI EAGPFKVGYL PVSHSIPESS GLVIDTPAGR IVHTGDFKLD QTPVIGEPFD
     PDLWASVAEP GVKALVCDST NVFSPHAGRS EASVAAPLKE LVARCEGMVV ATTFASNIAR
     LKSLAEAGQA AGRSVCLLGR AMRRMIAAGE ETGILGDFPK TVTAEEAADI PRENLMLIVT
     GSQGERRAAS AQLSRGKYLG LEMKEGDTFL FSSKTIPGNE RGVIRIMNAF SEMGVDVVDD
     HGGDYHVSGH ANRPDLQAVH GLLKPQMLIP MHGEHRHLRE HAKLGKESGI PSAVAVNGTM
     LDLTGDLPQV VDYVETGRTY LDGSVKIGAM DGVVRDRIRM ALNGHVIVTV IIDEEDEPLG
     EPWVELMGLP ETGASGAPLA DVLEGELTQV MMRMGAKTLT DDDRIEEELR RAARRTAQEE
     IGKKPEVTVI TSRLV
//
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