ID A0A1Y5TDM7_9PROT Unreviewed; 426 AA.
AC A0A1Y5TDM7;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase {ECO:0000313|EMBL:SLN59557.1};
DE EC=3.5.1.- {ECO:0000313|EMBL:SLN59557.1};
GN ORFNames=OCH7691_02619 {ECO:0000313|EMBL:SLN59557.1};
OS Oceanibacterium hippocampi.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sneathiellales;
OC Sneathiellaceae; Oceanibacterium.
OX NCBI_TaxID=745714 {ECO:0000313|EMBL:SLN59557.1, ECO:0000313|Proteomes:UP000193200};
RN [1] {ECO:0000313|EMBL:SLN59557.1, ECO:0000313|Proteomes:UP000193200}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CECT 7691 {ECO:0000313|EMBL:SLN59557.1,
RC ECO:0000313|Proteomes:UP000193200};
RA Afonso C.L., Miller P.J., Scott M.A., Spackman E., Goraichik I.,
RA Dimitrov K.M., Suarez D.L., Swayne D.E.;
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Co(2+); Xref=ChEBI:CHEBI:48828;
CC Evidence={ECO:0000256|ARBA:ARBA00001941};
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- SIMILARITY: Belongs to the peptidase M20A family.
CC {ECO:0000256|ARBA:ARBA00006247}.
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DR EMBL; FWFR01000002; SLN59557.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y5TDM7; -.
DR InParanoid; A0A1Y5TDM7; -.
DR OrthoDB; 9809784at2; -.
DR Proteomes; UP000193200; Unassembled WGS sequence.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd03895; M20_ArgE_DapE-like; 1.
DR Gene3D; 3.30.70.360; -; 1.
DR Gene3D; 3.40.630.10; Zn peptidases; 1.
DR InterPro; IPR010182; ArgE/DapE.
DR InterPro; IPR036264; Bact_exopeptidase_dim_dom.
DR InterPro; IPR002933; Peptidase_M20.
DR InterPro; IPR011650; Peptidase_M20_dimer.
DR InterPro; IPR033687; YodQ-like.
DR NCBIfam; TIGR01910; DapE-ArgE; 1.
DR PANTHER; PTHR43808; ACETYLORNITHINE DEACETYLASE; 1.
DR PANTHER; PTHR43808:SF3; ACETYLORNITHINE DEACETYLASE-RELATED; 1.
DR Pfam; PF07687; M20_dimer; 1.
DR Pfam; PF01546; Peptidase_M20; 1.
DR SUPFAM; SSF55031; Bacterial exopeptidase dimerisation domain; 1.
DR SUPFAM; SSF53187; Zn-dependent exopeptidases; 1.
PE 3: Inferred from homology;
KW Cobalt {ECO:0000256|ARBA:ARBA00023285};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:SLN59557.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000193200}.
FT DOMAIN 205..317
FT /note="Peptidase M20 dimerisation"
FT /evidence="ECO:0000259|Pfam:PF07687"
SQ SEQUENCE 426 AA; 46378 MW; 4790C460BF8D19FE CRC64;
MSGTLPTAEI MKAVDAGFDA QCDFTAELTC FPSTRGAEQT AQDFMAREMR DRGLAVDRWK
IEVDDIAHLP GFSPVHVSYE NAWNVVGTHR PRGATGKSLI LNGHIDVVPV GPLDMWDRPP
FDPHVDDGWM YGRGAGDMKA GLAACVFALD ALKRTGHAPA AEVYVQSVVE EECTGNGALA
CLQRGYRADL AMIPEPMGEK LIRAQIGVIW FQVKIAGYPV HVADAGAGAN AIEAAMPIIE
ALHRLEADWN SAGRRHPAYA GVEHPINLNI GRIQGGDWPS SVPAWCVFDV RVAIFPDQPL
DEARAEIEAV IREAARNNRF LANSPPEIAY HGFLAEGYEL KGAEAAEAKL GHAHRTVYGE
PLREVATTAT TDARFFGLYA DTPALVYGPV SENIHGFNER VNLESVRRNT QAMALFIADW
CGLEKI
//