ID A0A1Y6HFX7_9XANT Unreviewed; 626 AA.
AC A0A1Y6HFX7;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Phage-related integrase {ECO:0000313|EMBL:SMR02429.1};
GN ORFNames=PD5205_01116 {ECO:0000313|EMBL:SMR02429.1};
OS Xanthomonas fragariae.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Xanthomonas.
OX NCBI_TaxID=48664 {ECO:0000313|EMBL:SMR02429.1, ECO:0000313|Proteomes:UP000195953};
RN [1] {ECO:0000313|EMBL:SMR02429.1, ECO:0000313|Proteomes:UP000195953}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PD5205 {ECO:0000313|EMBL:SMR02429.1};
RA Song R., Chenine A.L., Ruprecht R.M.;
RL Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; LT853885; SMR02429.1; -; Genomic_DNA.
DR RefSeq; WP_040762876.1; NZ_ORZZ01000174.1.
DR AlphaFoldDB; A0A1Y6HFX7; -.
DR STRING; 48664.BER92_05385; -.
DR KEGG; xfr:BER92_05385; -.
DR eggNOG; COG0582; Bacteria.
DR Proteomes; UP000195953; Chromosome 1.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0075713; P:establishment of integrated proviral latency; IEA:UniProtKB-KW.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0044826; P:viral genome integration into host DNA; IEA:UniProtKB-KW.
DR CDD; cd00801; INT_P4_C; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 3.30.160.390; Integrase, DNA-binding domain; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR038488; Integrase_DNA-bd_sf.
DR InterPro; IPR025166; Integrase_DNA_bind_dom.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR004107; Integrase_SAM-like_N.
DR PANTHER; PTHR30629; PROPHAGE INTEGRASE; 1.
DR PANTHER; PTHR30629:SF2; PROPHAGE INTEGRASE INTS-RELATED; 1.
DR Pfam; PF13356; Arm-DNA-bind_3; 1.
DR Pfam; PF14659; Phage_int_SAM_3; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248};
KW Viral genome integration {ECO:0000256|ARBA:ARBA00023195};
KW Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296}.
FT DOMAIN 97..181
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 206..398
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 626 AA; 71826 MW; 01B73A810AB5B2E1 CRC64;
MLTDMVVRQA KASDKPYTLA DFDGLFLYVS PVGGKAWHFR YTWVGQRARI SLGSYPELSL
REAREFRDQA RALVAKGINP RIDRKQKRQA IRLAGENTFM AVYEKWMEHR QLTLEEGRQS
SLEQIRRVFK KDVFPYLKRY TIYEITRPVL LEVIGRIEKR ESLSVAEKMR TWLKQLADYA
MVVIPGMVEH PAIDLHVVAV PLLPVEHNPL LRMPELPLFL QTLRKYRGMQ MTQLAIRLLL
LTGVRTGELR LATPDQFDLE QGLWIIPVMS LKQRKMLTKK KRKRVTDIPP YIVPLPVQAI
EIVRHMLDLF KPAQTYLFPG VKRITARMSE NTVNRAIKRL GYDGRLTGHG IRATISTALN
ELGYPKVWVD AQLSHADPNR ISATYNHAEY VEQRRLMMQD WADRLDLFEQ NQVQIASTHL
TIHLQGVPTI AGQKVTPLPA LGQHAPIMLV APNEQTMPAV GAGTQRLSAI QMPEYALPKI
SEVQRERLEV LDIFEGPDNL VVADYAKLAG KSRRWITYEI QARNLLSIQL GNKGQRVPVW
QLNMFKRRLV QAVLKRLHRG VDTWDIYYAL TRPREELDGM SPIEALTSDN QQAMVEAVCQ
AVSEATTPVV EKRVPINRIA ECMSEF
//
