ID   A0A1Y6KYP8_9GAMM        Unreviewed;       284 AA.
AC   A0A1Y6KYP8;
DT   30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT   30-AUG-2017, sequence version 1.
DT   24-JAN-2024, entry version 20.
DE   SubName: Full=RNA polymerase sigma factor RpoS {ECO:0000313|EMBL:SMY16496.1};
GN   Name=rpoS_2 {ECO:0000313|EMBL:SMY16496.1};
GN   ORFNames=PAQU9191_01727 {ECO:0000313|EMBL:SMY16496.1};
OS   Photobacterium aquimaris.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Photobacterium.
OX   NCBI_TaxID=512643 {ECO:0000313|EMBL:SMY16496.1, ECO:0000313|Proteomes:UP000196485};
RN   [1] {ECO:0000313|Proteomes:UP000196485}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=type strain: CECT 9192 {ECO:0000313|Proteomes:UP000196485};
RA   Rodrigo-Torres L., Arahal R. D., Lucena T.;
RL   Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; FYAH01000002; SMY16496.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1Y6KYP8; -.
DR   Proteomes; UP000196485; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   CDD; cd06171; Sigma70_r4; 1.
DR   Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR012761; RNA_pol_sigma_RpoS.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02394; rpoS_proteo; 1.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR   PANTHER; PTHR30603:SF67; RNA POLYMERASE SIGMA FACTOR RPOS; 1.
DR   Pfam; PF00140; Sigma70_r1_2; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PIRSF; PIRSF000770; RNA_pol_sigma-SigE/K; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR   PROSITE; PS00716; SIGMA70_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000196485};
KW   Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          239..265
FT                   /note="RNA polymerase sigma-70"
FT                   /evidence="ECO:0000259|PROSITE:PS00716"
SQ   SEQUENCE   284 AA;  32671 MW;  12D1F91F9890B4F2 CRC64;
     MQEVAFESDV VRLYLNEISL KPLLTKSDEI LYSRKSLLGD ESAKRVLIES NLRLVVSLAK
     KYRASTLLLS DLIDEGNIGL ITAVEKFDPE KGFRFSTYAS WWIKQTIERA IHNQSRTIRL
     PVHVSKEVNT ILRAHRDLMS KNNNEPSPEE IADYLKRDVS EVSSLMTNNL NVLSFEQTAN
     DDDNHSLSYF VADENASLDK ELETNDMQMI TKKVLSKLSE RDREIICRRF GLLGYEPQTL
     QEVADAVGLT RERIRQLQIK NLTRLRRSLA NDNYDMEMLF SVPA
//