ID A0A1Z1FAM7_9SPHN Unreviewed; 364 AA.
AC A0A1Z1FAM7;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE RecName: Full=Peptidoglycan binding-like domain-containing protein {ECO:0000259|Pfam:PF01471};
GN ORFNames=A9D14_05750 {ECO:0000313|EMBL:ARU15776.1};
OS Croceicoccus marinus.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Erythrobacteraceae; Croceicoccus.
OX NCBI_TaxID=450378 {ECO:0000313|EMBL:ARU15776.1, ECO:0000313|Proteomes:UP000195807};
RN [1] {ECO:0000313|EMBL:ARU15776.1, ECO:0000313|Proteomes:UP000195807}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=E4A9 {ECO:0000313|EMBL:ARU15776.1,
RC ECO:0000313|Proteomes:UP000195807};
RA Wu Y.-H., Cheng H., Xu L., Huo Y.-Y., Wang C.-S., Xu X.-W.;
RT "Complete genome sequence of esterase-producing bacterium Croceicoccus
RT marinus E4A9.";
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the YkuD family.
CC {ECO:0000256|ARBA:ARBA00005992}.
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DR EMBL; CP019602; ARU15776.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Z1FAM7; -.
DR STRING; 450378.GCA_001661675_01149; -.
DR KEGG; cman:A9D14_05750; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000195807; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0004180; F:carboxypeptidase activity; IEA:UniProt.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 1.10.101.10; PGBD-like superfamily/PGBD; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR002477; Peptidoglycan-bd-like.
DR InterPro; IPR036365; PGBD-like_sf.
DR InterPro; IPR036366; PGBDSf.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR41533; L,D-TRANSPEPTIDASE HI_1667-RELATED; 1.
DR PANTHER; PTHR41533:SF1; L,D-TRANSPEPTIDASE YCBB-RELATED; 1.
DR Pfam; PF01471; PG_binding_1; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR SUPFAM; SSF47090; PGBD-like; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000195807};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 21..39
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 164..209
FT /note="Peptidoglycan binding-like"
FT /evidence="ECO:0000259|Pfam:PF01471"
SQ SEQUENCE 364 AA; 38520 MW; 2DD580B5EB4688B8 CRC64;
MPRVRARTAD AVRWREREGG LKWGLAAAAA LAFVTSFGGG DAIRDADHDA GTASERSAKV
TPAIGTAAAA DRQERLEPGL SAVNVHYLDG TLAPSETELA RTASLQASFA DTGIGELAGE
ANPIYLALLE GLRTYQEEWS VLPQIALGNS PVEVGDQGTE VANLFQRLGL AAASDGRFDD
TLAKKIAEFQ EIHGLPVTGM ADAATIAALN RGSAHYEAII RANLERARRI SAKADGKFVL
VNTAAADLIA FEQGQPALRM KVALGSTDRP TVALADRIET IVVNPPWNLP PHLVQSMIAP
EVVREGIGYL EENGYVVLSD WSDDAVAADP ASVDWQAVSE GKAFARVRQN PGVDRRAKGT
PLAG
//
