ID A0A1Z2TL39_9EURY Unreviewed; 264 AA.
AC A0A1Z2TL39;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:ASA77171.1};
GN ORFNames=CDI07_02305 {ECO:0000313|EMBL:ASA77171.1};
OS Thermococcus sp. 5-4.
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Thermococcus.
OX NCBI_TaxID=2008440 {ECO:0000313|EMBL:ASA77171.1, ECO:0000313|Proteomes:UP000196843};
RN [1] {ECO:0000313|EMBL:ASA77171.1, ECO:0000313|Proteomes:UP000196843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=5-4 {ECO:0000313|EMBL:ASA77171.1,
RC ECO:0000313|Proteomes:UP000196843};
RX PubMed=28628615; DOI=10.1371/journal.pgen.1006847;
RA Cossu M., Badel C., Catchpole R., Daniele G., Marguet E., Barbe V.,
RA Forterre P., Oberto J.;
RT "Flipping chromosomes in deep-sea archaea.";
RL PLoS Genet. 13:e1006847-e1006847(2017).
RN [2] {ECO:0000313|Proteomes:UP000196843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=5-4 {ECO:0000313|Proteomes:UP000196843};
RA Cossu M., Badel C., Catchpole R., Daniele G., Marguet E., Barbe V.,
RA Forterre P., Oberto J.;
RT "Flipping Chromosomes in Deep-Sea Archaea.";
RL PLoS Genet. 0:0-0(2017).
CC -!- SIMILARITY: Belongs to the transcriptional regulator TrmB family.
CC {ECO:0000256|ARBA:ARBA00007287}.
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DR EMBL; CP021848; ASA77171.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Z2TL39; -.
DR KEGG; thh:CDI07_02305; -.
DR OrthoDB; 30795at2157; -.
DR Proteomes; UP000196843; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.870.10; Endonuclease Chain A; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR021586; Tscrpt_reg_TrmB_C.
DR InterPro; IPR002831; Tscrpt_reg_TrmB_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; NF041141; tran_reg_TrmBL2; 1.
DR PANTHER; PTHR34293; HTH-TYPE TRANSCRIPTIONAL REGULATOR TRMBL2; 1.
DR PANTHER; PTHR34293:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR TRMBL2; 1.
DR Pfam; PF11495; Regulator_TrmB; 1.
DR Pfam; PF01978; TrmB; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023015};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..77
FT /note="Transcription regulator TrmB N-terminal"
FT /evidence="ECO:0000259|Pfam:PF01978"
FT DOMAIN 126..262
FT /note="Transcription regulator TrmB C-terminal"
FT /evidence="ECO:0000259|Pfam:PF11495"
SQ SEQUENCE 264 AA; 30515 MW; 419C23CCB41C68EE CRC64;
MVKDRMVELL QEHFELNLYE ARAYVALVGF GVLTPAELAS VSEVPAPRTY DVLRSLEKKG
FAISQPGKVN KYRPVHPQNI LEKFIEEWQE RVAEELKAKK KAKEELLELM SPLIETEIPK
YGVEKVWVVR GIRNATLKTK EMFEEVKEQI LLADDGYIAV NLESDIIKAI DNGAKAKIIV
TETVFHRLGT SKIMDYYKAG KLELKVIDKL ELPMLICDDE VFFALEDMAA RYFNYETQIW
IKDFRVKALF EGKFNEYWKA AKKA
//
