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Database: UniProt
Entry: A0A1Z4EMK2_9MYCO
LinkDB: A0A1Z4EMK2_9MYCO
Original site: A0A1Z4EMK2_9MYCO 
ID   A0A1Z4EMK2_9MYCO        Unreviewed;       273 AA.
AC   A0A1Z4EMK2;
DT   27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT   27-SEP-2017, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   RecName: Full=DNA ligase (ATP) {ECO:0000256|ARBA:ARBA00012727};
DE            EC=6.5.1.1 {ECO:0000256|ARBA:ARBA00012727};
GN   Name=ligD_1 {ECO:0000313|EMBL:BAX94227.1};
GN   ORFNames=MSG_04105 {ECO:0000313|EMBL:BAX94227.1};
OS   Mycobacterium shigaense.
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae;
OC   Mycobacterium; Mycobacterium simiae complex.
OX   NCBI_TaxID=722731 {ECO:0000313|EMBL:BAX94227.1, ECO:0000313|Proteomes:UP000217736};
RN   [1] {ECO:0000313|Proteomes:UP000217736}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=UN-152 {ECO:0000313|Proteomes:UP000217736};
RA   Fukano H., Yoshida M., Kazumi Y., Ogura Y., Mitarai S., Hayashi T.,
RA   Hoshino Y.;
RT   "Complete Genome Sequence of Mycobacterium shigaense.";
RL   Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-
CC         (deoxyribonucleotide)m = (deoxyribonucleotide)n+m + AMP +
CC         diphosphate.; EC=6.5.1.1; Evidence={ECO:0000256|ARBA:ARBA00034003};
CC   -!- SIMILARITY: Belongs to the ATP-dependent DNA ligase family.
CC       {ECO:0000256|ARBA:ARBA00007572}.
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DR   EMBL; AP018164; BAX94227.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1Z4EMK2; -.
DR   KEGG; mshg:MSG_04105; -.
DR   Proteomes; UP000217736; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd07906; Adenylation_DNA_ligase_LigD_LigC; 1.
DR   CDD; cd07971; OBF_DNA_ligase_LigD; 1.
DR   Gene3D; 3.30.1490.70; -; 1.
DR   Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   NCBIfam; TIGR02779; NHEJ_ligase_lig; 1.
DR   PANTHER; PTHR45674:SF4; DNA LIGASE 1; 1.
DR   PANTHER; PTHR45674; DNA LIGASE 1/3 FAMILY MEMBER; 1.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   3: Inferred from homology;
KW   Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:BAX94227.1}.
FT   DOMAIN          61..180
FT                   /note="ATP-dependent DNA ligase family profile"
FT                   /evidence="ECO:0000259|PROSITE:PS50160"
SQ   SEQUENCE   273 AA;  30350 MW;  687BB9D332EDFB70 CRC64;
     MLVDADRGTV RLRSRSGRDV TRDYPQLGSI ADDLTDHHMV LDGEVVALNA AGVPSFNAMQ
     NRNRATRVEY WAFDLLYLDG RSLLRAKYQD RRKLLETLAS SAKLIVPDLL PGDGAQALDY
     SSVRGWEGVV AKRRDSTYQP GRRSASWLKD KHWSTQEIVI GGWKAGEGGR TSGIGSLLMG
     IPGVGGLQFA GRVGTGFTER DLAHLKKTMA PLHTDQSPFD PPLPRIEARG VTYVEPVLVG
     EVRYSEWTPD NRLRQSSWRG LRPDKKPSEV VRE
//
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