ID A0A1Z5H844_9GAMM Unreviewed; 867 AA.
AC A0A1Z5H844;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=SSD domain-containing protein {ECO:0000259|PROSITE:PS50156};
GN ORFNames=bplSymb_SCF00707P015 {ECO:0000313|EMBL:GAW85470.1};
OS Bathymodiolus platifrons methanotrophic gill symbiont.
OC Bacteria; Pseudomonadota; Gammaproteobacteria.
OX NCBI_TaxID=113268 {ECO:0000313|EMBL:GAW85470.1, ECO:0000313|Proteomes:UP000196430};
RN [1] {ECO:0000313|EMBL:GAW85470.1, ECO:0000313|Proteomes:UP000196430}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HPD1508-B01-01 {ECO:0000313|EMBL:GAW85470.1,
RC ECO:0000313|Proteomes:UP000196430};
RX PubMed=28453654; DOI=10.1093/gbe/evx082;
RA Takishita K., Takaki Y., Chikaraishi Y., Ikuta T., Ozawa G., Yoshida T.,
RA Ohkouchi N., Fujikura K.;
RT "Genomic Evidence that Methanotrophic Endosymbionts Likely Provide Deep-Sea
RT Bathymodiolus Mussels with a Sterol Intermediate in Cholesterol
RT Biosynthesis.";
RL Genome Biol. Evol. 9:1148-1160(2017).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAW85470.1}.
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DR EMBL; BDMN01000062; GAW85470.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Z5H844; -.
DR OrthoDB; 7067407at2; -.
DR Proteomes; UP000196430; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR InterPro; IPR017841; Hopanoid_biosynth_HpnN.
DR InterPro; IPR004869; MMPL_dom.
DR InterPro; IPR000731; SSD.
DR NCBIfam; TIGR03480; HpnN; 1.
DR PANTHER; PTHR33406; MEMBRANE PROTEIN MJ1562-RELATED; 1.
DR PANTHER; PTHR33406:SF2; MEMBRANE PROTEIN SCO6666-RELATED; 1.
DR Pfam; PF03176; MMPL; 2.
DR SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR PROSITE; PS50156; SSD; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000196430};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 18..37
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 272..290
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 297..320
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 326..345
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 366..389
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 401..425
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 453..473
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 717..737
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 744..764
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 770..791
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 812..834
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 840..860
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 297..424
FT /note="SSD"
FT /evidence="ECO:0000259|PROSITE:PS50156"
SQ SEQUENCE 867 AA; 95087 MW; BC8E6FF0C586C6E9 CRC64;
MSVAARILEW QGCFITRYAW LIVCSALLLT GLSIYYAKDH LGVNNNSSEM LSPDLPFQQN
TKRLETAFPQ DTNAIIFVVD TQTPEETAIT ANKLLARLNN QTNSFESSYI PEDNAFFRQQ
AFLYLTNEEL DKLATNLTDA QPFIGYLAQN HHLQGLFHIL TEALENKDSV ISHSLPALLT
SISTAISKTA KNENHHISWQ EILNPNSQSN KTRRIVITKP KLNFLSMMPV DVAIEKARAV
SSELMLEMPG SNIRITGDIA LQHEELEDIG EGAVLSGIGS LILVLLILFR CFRSIKLLLA
TLITLLMGLT LTAGFAAVAI GHLNVISVSF AALYIGLGVD FAIHMNLHYR DEIVNKHSNH
LSIKKALHSV GFSLFLCALT TSIGFFAFVP TDYVGVSELG LISGVSMFIG LLVSLLVLPA
LLTLFKLKHA QPFYQPTQAS FLQTLPFRYK KTIRIGTVLL TFACLFAIPY ITFNSNPIDM
RNPKAASVTT FKDLLKSKTD SPYALYALSD NQEQARHTAA RLEQLPSVHG AVSLESLVAT
DQEDKLYTIE DLAMILGPQL SQFNSTLAAS DTITVLSQFN TTLYTLLENR TTSINPQILL
DLRSSIDTFI NTSNQSTEPG ILAQSLDNNI LGLLPYTINT LSQGLSAYEF GLADLPAAIR
LQWLSPAGLY RIMIMPEQDL NIPANLKQFT KEVQSIDPKA VGMPVGEMAS GEAVVNAFQQ
AFSAALFIIT LLLLFILKSI KKTLLVIGPL ILAGLLTCTV NIFLGIPFNF ANIIALPLLL
GMGVDSGIHI MHCLHENLDE GQHLLQTSTA RGVTFSSFTT MSSFISLALI PHFGISSMGI
TLAVGISFTL ICTLIILPAF SNRTIQL
//
