ID A0A1Z5H930_9GAMM Unreviewed; 581 AA.
AC A0A1Z5H930;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 15.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=bplSymb_SCF01601P007 {ECO:0000313|EMBL:GAW85988.1};
OS Bathymodiolus platifrons methanotrophic gill symbiont.
OC Bacteria; Pseudomonadota; Gammaproteobacteria.
OX NCBI_TaxID=113268 {ECO:0000313|EMBL:GAW85988.1, ECO:0000313|Proteomes:UP000196430};
RN [1] {ECO:0000313|EMBL:GAW85988.1, ECO:0000313|Proteomes:UP000196430}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HPD1508-B01-01 {ECO:0000313|EMBL:GAW85988.1,
RC ECO:0000313|Proteomes:UP000196430};
RX PubMed=28453654; DOI=10.1093/gbe/evx082;
RA Takishita K., Takaki Y., Chikaraishi Y., Ikuta T., Ozawa G., Yoshida T.,
RA Ohkouchi N., Fujikura K.;
RT "Genomic Evidence that Methanotrophic Endosymbionts Likely Provide Deep-Sea
RT Bathymodiolus Mussels with a Sterol Intermediate in Cholesterol
RT Biosynthesis.";
RL Genome Biol. Evol. 9:1148-1160(2017).
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAW85988.1}.
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DR EMBL; BDMN01000119; GAW85988.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Z5H930; -.
DR OrthoDB; 9809852at2; -.
DR Proteomes; UP000196430; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:GAW85988.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:GAW85988.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000196430}.
FT DOMAIN 76..235
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 326..457
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 472..575
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
FT COILED 311..338
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 581 AA; 64196 MW; C44EC2DB9CEE23FD CRC64;
MHYFGITKKI VERPLLGRDA GVPEPNAVLK RIYLARGIKS DVDLQRGLAQ LPSPWLLTGM
EEMVIYLINA IEQQKKIVIV ADFDADGATS CTVAMKGLKL LGADNVDFIV PNRFEYGYGL
TPEIVELVKE KQADVLVTVD NGISSLSGVQ AAKQAGIQVL VTDHHLPGDQ LPDADAIVNP
NLPNDEFPSR ALAGVGVMFY VLMALRSRMR EQGWFITRDI AEPNLAQLLD LVALGTIADV
VALDQVNRIL VHQGLLRIRS GKGHKGIKAL VEIAGRNLHS LGSSDLGFAI GPRLNAAGRM
DDMSVGIQCL LSNEEILAKK LAQQMDELNS DRREVEGQMK QEAMSLLKDM NVLDEQHLTA
GVCIYNEDWH QGVIGILASR IKDRLNRPVI AFANAGDGEV KGSARSIPGV HIRDVLSDIA
VAHPKVLQKF GGHAMAAGLS IQLHDYPVFM LAFDKAVEQR LVDVDLDQKV YTDGELTDAE
MTIGFCELLK NAGPWGQEFP EPLFHGVFDV VQSRIVGQQH LKLVLRKQND ELLIDAIAFF
VERPEYWLGI RQVNIAYKLD INEYKGQRSI QFIIDYIEKL A
//
