ID A0A1Z5JA02_FISSO Unreviewed; 461 AA.
AC A0A1Z5JA02;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Ribosome biogenesis protein YTM1 {ECO:0000313|EMBL:GAX10810.1};
GN ORFNames=FisN_1Hh351 {ECO:0000313|EMBL:GAX10810.1};
OS Fistulifera solaris (Oleaginous diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Naviculaceae;
OC Fistulifera.
OX NCBI_TaxID=1519565 {ECO:0000313|EMBL:GAX10810.1, ECO:0000313|Proteomes:UP000198406};
RN [1] {ECO:0000313|EMBL:GAX10810.1, ECO:0000313|Proteomes:UP000198406}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JPCC DA0580 {ECO:0000313|EMBL:GAX10810.1,
RC ECO:0000313|Proteomes:UP000198406};
RX PubMed=25634988; DOI=10.1105/tpc.114.135194;
RA Tanaka T., Maeda Y., Veluchamy A., Tanaka M., Abida H., Marechal E.,
RA Bowler C., Muto M., Sunaga Y., Tanaka M., Yoshino T., Taniguchi T.,
RA Fukuda Y., Nemoto M., Matsumoto M., Wong P.S., Aburatani S., Fujibuchi W.;
RT "Oil accumulation by the oleaginous diatom Fistulifera solaris as revealed
RT by the genome and transcriptome.";
RL Plant Cell 27:162-176(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAX10810.1}.
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DR EMBL; BDSP01000025; GAX10810.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Z5JA02; -.
DR InParanoid; A0A1Z5JA02; -.
DR OrthoDB; 36593at2759; -.
DR Proteomes; UP000198406; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR012972; NLE.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19855:SF11; RIBOSOME BIOGENESIS PROTEIN WDR12; 1.
DR PANTHER; PTHR19855; WD40 REPEAT PROTEIN 12, 37; 1.
DR Pfam; PF08154; NLE; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000198406};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 23..96
FT /note="NLE"
FT /evidence="ECO:0000259|Pfam:PF08154"
FT REPEAT 217..257
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 283..323
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 323..364
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 373..413
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 461 AA; 50392 MW; 739AEB7BAD0F75F8 CRC64;
MSDSSSSSDS DDGEKVRISL KLSTNCTQRD LEVSSEPVAV PVDVTRKGLS AIINHLLGRK
LVDPSEEEDD DDSSKLPSLN FDFILGSSNK LLRTSVGREA RRQGHNFEQA ITITYFPSQP
APEDQGESEP MPDWIGALSA VSGMVFAGCY DGSLQVLQEE TMEPLVPRVF SHTGAIKCVS
SVARNDDSYY VATGSMDHSL SVQLYQDQTL QQVASCTGGH NAAVSCVDFG NSSQLASGDW
GGEVYLWNLD QDISEQATVK KVKKDKSNET ACVVRYLTPT GSMKAHSSQI SGIAWNSPDQ
MITGSWDHSI KVWNVERQDC LLTLNSSRVV TCLDASRVSA ALATGHPDCT VRLWDVRTKS
ETSSWSVSDN TFRPSHKAWV SAVQWFDAYQ LVTTSHDGMV KWWDIRSSLP LHSVRAFSKN
KGLALSATSS AIYVGGTDNR VKRLQIPQSG MNVHEQGIAK Q
//
