ID A0A1Z5JB31_FISSO Unreviewed; 512 AA.
AC A0A1Z5JB31;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=Replication stress response regulator SDE2 {ECO:0000256|ARBA:ARBA00034556};
GN ORFNames=FisN_9Hh260 {ECO:0000313|EMBL:GAX11166.1};
OS Fistulifera solaris (Oleaginous diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Naviculaceae;
OC Fistulifera.
OX NCBI_TaxID=1519565 {ECO:0000313|EMBL:GAX11166.1, ECO:0000313|Proteomes:UP000198406};
RN [1] {ECO:0000313|EMBL:GAX11166.1, ECO:0000313|Proteomes:UP000198406}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JPCC DA0580 {ECO:0000313|EMBL:GAX11166.1,
RC ECO:0000313|Proteomes:UP000198406};
RX PubMed=25634988; DOI=10.1105/tpc.114.135194;
RA Tanaka T., Maeda Y., Veluchamy A., Tanaka M., Abida H., Marechal E.,
RA Bowler C., Muto M., Sunaga Y., Tanaka M., Yoshino T., Taniguchi T.,
RA Fukuda Y., Nemoto M., Matsumoto M., Wong P.S., Aburatani S., Fujibuchi W.;
RT "Oil accumulation by the oleaginous diatom Fistulifera solaris as revealed
RT by the genome and transcriptome.";
RL Plant Cell 27:162-176(2015).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SDE2 family.
CC {ECO:0000256|ARBA:ARBA00008726}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAX11166.1}.
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DR EMBL; BDSP01000036; GAX11166.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Z5JB31; -.
DR InParanoid; A0A1Z5JB31; -.
DR OrthoDB; 3145419at2759; -.
DR Proteomes; UP000198406; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd11709; SPRY; 1.
DR Gene3D; 2.60.120.920; -; 1.
DR InterPro; IPR001870; B30.2/SPRY.
DR InterPro; IPR043136; B30.2/SPRY_sf.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR025086; SDE2-like_C_dom.
DR InterPro; IPR024974; Sde2_N.
DR InterPro; IPR003877; SPRY_dom.
DR PANTHER; PTHR12786:SF1; REPLICATION STRESS RESPONSE REGULATOR SDE2; 1.
DR PANTHER; PTHR12786; SPLICING FACTOR SF3A-RELATED; 1.
DR Pfam; PF13297; SDE2_2C; 1.
DR Pfam; PF13019; Sde2_N_Ubi; 1.
DR Pfam; PF00622; SPRY; 1.
DR SMART; SM00449; SPRY; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
DR PROSITE; PS50188; B302_SPRY; 1.
PE 3: Inferred from homology;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306};
KW Cell division {ECO:0000256|ARBA:ARBA00022618};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Mitosis {ECO:0000256|ARBA:ARBA00022776};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000198406};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 196..387
FT /note="B30.2/SPRY"
FT /evidence="ECO:0000259|PROSITE:PS50188"
FT REGION 393..412
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 421..442
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 421..437
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 512 AA; 57021 MW; 6DA2B8984B0F4385 CRC64;
MQQSLIRFQN QTHVLATHDP YRILELISDT TGWPQARLIL SEWNPPFGTV RVLSGLRGGK
GGFGTLLKGQ ARQAGAKATS NFGACRDLQG RRLQHVNQAI EGQLWLEWKR RVEAGTATEE
EMTQALLNTD TGIAGWHLQL PAWADVSAKK EQRKWKRAFY QWKKEREAVR QRKEEGKRLQ
ERQVHAYVEA AEEASSQVQS TLEQALQAGL REQKRAKMEP DPPSALITLS GDATLAFESH
RWRLQSQSNF CTVGVVLQSV SVALYYYEIV VLTGGVVQVG WANSAFQPSS ESGDGVGDCP
NSWGYDGSRQ IRLHAEHTDE YGTQPWQAND VVGCLYNAAT GTISYFVNGN DMGTAFEVER
GLWLFPVISI NPGEIVELRL HKDEMSYHVA SSTAVGEVRT QEDTTLEDFS DDAYDENVES
KLDAEQNQNE STHTDKSATK EQSTLVVEPL NLTDYNSIEE LEELGLDRLK GALMAIGVKC
GGTLQERASR LFSLKGLDAS DFPKRLLANK KA
//
