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Database: UniProt
Entry: A0A1Z5JC24_FISSO
LinkDB: A0A1Z5JC24_FISSO
Original site: A0A1Z5JC24_FISSO 
ID   A0A1Z5JC24_FISSO        Unreviewed;       960 AA.
AC   A0A1Z5JC24;
DT   27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT   27-SEP-2017, sequence version 1.
DT   24-JAN-2024, entry version 20.
DE   SubName: Full=Pre-mRNA-processing factor 6 {ECO:0000313|EMBL:GAX11509.1};
GN   ORFNames=FisN_22Lh200 {ECO:0000313|EMBL:GAX11509.1};
OS   Fistulifera solaris (Oleaginous diatom).
OC   Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC   Bacillariophyceae; Bacillariophycidae; Naviculales; Naviculaceae;
OC   Fistulifera.
OX   NCBI_TaxID=1519565 {ECO:0000313|EMBL:GAX11509.1, ECO:0000313|Proteomes:UP000198406};
RN   [1] {ECO:0000313|EMBL:GAX11509.1, ECO:0000313|Proteomes:UP000198406}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JPCC DA0580 {ECO:0000313|EMBL:GAX11509.1,
RC   ECO:0000313|Proteomes:UP000198406};
RX   PubMed=25634988; DOI=10.1105/tpc.114.135194;
RA   Tanaka T., Maeda Y., Veluchamy A., Tanaka M., Abida H., Marechal E.,
RA   Bowler C., Muto M., Sunaga Y., Tanaka M., Yoshino T., Taniguchi T.,
RA   Fukuda Y., Nemoto M., Matsumoto M., Wong P.S., Aburatani S., Fujibuchi W.;
RT   "Oil accumulation by the oleaginous diatom Fistulifera solaris as revealed
RT   by the genome and transcriptome.";
RL   Plant Cell 27:162-176(2015).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:GAX11509.1}.
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DR   EMBL; BDSP01000041; GAX11509.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1Z5JC24; -.
DR   InParanoid; A0A1Z5JC24; -.
DR   OrthoDB; 655233at2759; -.
DR   Proteomes; UP000198406; Unassembled WGS sequence.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR003107; HAT.
DR   InterPro; IPR010491; PRP1_N.
DR   InterPro; IPR045075; Syf1-like.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR11246; PRE-MRNA SPLICING FACTOR; 1.
DR   PANTHER; PTHR11246:SF1; PRE-MRNA-PROCESSING FACTOR 6; 1.
DR   Pfam; PF06424; PRP1_N; 2.
DR   Pfam; PF13428; TPR_14; 1.
DR   Pfam; PF14559; TPR_19; 1.
DR   SMART; SM00386; HAT; 10.
DR   SMART; SM00028; TPR; 4.
DR   SUPFAM; SSF48452; TPR-like; 4.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000198406};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   DOMAIN          11..39
FT                   /note="PRP1 splicing factor N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF06424"
FT   DOMAIN          87..180
FT                   /note="PRP1 splicing factor N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF06424"
FT   REGION          1..143
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        100..143
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   960 AA;  105207 MW;  BE6BE9409F4FB07A CRC64;
     MSAFRGRGAV PPKNYVPGLG RGAAGFTTRS DVGPVVPEDA VTGSGSRAAE ARKQLQFGAP
     PANYVAGAGR GAGTLNAQGD EGPVGAYDSF SGYSAAPQKG QYDDDDDEAD KIWATIDERM
     NRKRKKKGDN TQDDADDDAG GRKRVRARIG AQFHELKEKL AEVTEDQWAS IPDVGDHSLK
     YKQQRRQQDT FTPLSDSLIE QRNKSQLDAS AGNAALAGTT IADDGSGFKS VVADMSGLSA
     ARGTVLGISL DRMSGSVAGN QTSIDPKGYL TSLSGIQSVS NAEVADINKA RLLLKSVRDT
     NPKHGPGWIA AARVEEAAGK LLQARKIIQE ACEICADNED VWLEAARLHP HDVAKSILAT
     AVRRVPKSVK IFLKAADLEH VEANKKAVLR KGLEANPSSI TLWKAAIALE NAEDARLLLQ
     VAVEKVPHSV EMWLALARLE SYKNAQRVLN SARKALPNDR SIWIAAARLE ESQNHDEVID
     KIIQRAVKSL EKNEAVVTRA QWLQEAEAAE SSGAPLTSAA IIKYTIGKDV DDEDRQRTWT
     EDAKGAAARG SIATARAILS HALSAFPTKR TLWTQAIDLE RNHGTAKTLD EVLEAASERL
     PQVEIFWLLR AKEQWVNGDV NKARDILAKA FAVNPESEAV WLAASKLEHE NGEVERARFF
     LERARQRAPT ARVYMKAALL EREQTNFDDA LQLIEEGLSK FVKFSKLYMM GGQICSENLP
     RNKTSLSRAR KFYERGLKEC PESHILWILA SRLEEEAVHF EDVATNSQGS GATKARSILE
     LARLKNPKNP DLWLESIRLE RRVGTTKLAE TQMAKALQEC PKSGILLAES ILSSPRVEQK
     SKAAEAIKRC PDDPLVIAAV ASLFASENKN DKARKWFDRA TVLNPDIGDI WARFYLFELK
     SGTQDQQEKV KAACIAAEPK HGDIWASIMK DMKNRGKSVA EGLELVAEHI LLEQKKALVS
//
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