ID A0A1Z5JQC8_FISSO Unreviewed; 1086 AA.
AC A0A1Z5JQC8;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=DNA repair protein RAD5 {ECO:0000313|EMBL:GAX16096.1};
GN ORFNames=FisN_20Hh227 {ECO:0000313|EMBL:GAX16096.1};
OS Fistulifera solaris (Oleaginous diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Naviculaceae;
OC Fistulifera.
OX NCBI_TaxID=1519565 {ECO:0000313|EMBL:GAX16096.1, ECO:0000313|Proteomes:UP000198406};
RN [1] {ECO:0000313|EMBL:GAX16096.1, ECO:0000313|Proteomes:UP000198406}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JPCC DA0580 {ECO:0000313|EMBL:GAX16096.1,
RC ECO:0000313|Proteomes:UP000198406};
RX PubMed=25634988; DOI=10.1105/tpc.114.135194;
RA Tanaka T., Maeda Y., Veluchamy A., Tanaka M., Abida H., Marechal E.,
RA Bowler C., Muto M., Sunaga Y., Tanaka M., Yoshino T., Taniguchi T.,
RA Fukuda Y., Nemoto M., Matsumoto M., Wong P.S., Aburatani S., Fujibuchi W.;
RT "Oil accumulation by the oleaginous diatom Fistulifera solaris as revealed
RT by the genome and transcriptome.";
RL Plant Cell 27:162-176(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAX16096.1}.
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DR EMBL; BDSP01000101; GAX16096.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Z5JQC8; -.
DR InParanoid; A0A1Z5JQC8; -.
DR OrthoDB; 200191at2759; -.
DR Proteomes; UP000198406; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd18008; DEXDc_SHPRH-like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR45626:SF22; DNA REPAIR PROTEIN RAD5; 1.
DR PANTHER; PTHR45626; TRANSCRIPTION TERMINATION FACTOR 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000198406};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 397..560
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 779..837
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 905..1069
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 54..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 243..289
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 730..754
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 249..266
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 732..751
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1086 AA; 121197 MW; A222A8DD2F5BC0CA CRC64;
MSDSSSILEK IQLLRNFCGD AWNDADYTDC LRQNGYNVEQ AAECLVTGRY TSKSNHPINL
SSPLPKKKKA PASKERSKVA SVQPRKSPPR MSGNWMLLCN RWISNAINTA RNGQTGYQEN
VTISASPNKM DLRYQGDRAE GKMPEDLTQI LVPLLRENWI RAEGKFLMAE KNLPIGAHVP
LTVQIFVDVD RFFAVFDGHE ETALPAFAAK QRQAKPTSWL SSAAFGLLQW AEHGNTPDFS
RMAEEVEEGA EWNEADEDDD EADDRSTAEV TSDTGLNLEE AEQPEGFTNV TLRPYQKQAL
HWMWQRETAS ETQEEVQGRL ELLSEMAGVT KKNKMEIMDS KENIVCDCGP VQVAPEFRPS
VIHHPLWSCR FLASPDMTEV KPFYVHELLG VASITPPRPP RPCSGGILAD AMGLGKTVML
LALLLKGKQE RNEKGTTIVV AKLSLLPQWE QEIKTKTGLT PLVYYGSSGR IGASDFEEVD
VVVTTYGTLQ AEVRNPQSAI LSFQWQRVIL DEAHCIRNSG TVVSKACCQL QAPHRWCVTG
TVIQNSLEDV YGMMKFLRHE PWCIATFWKA AITNATSANT ENPTDGASLA LDRVRHLLGP
ILLRRTKDSV ALDGNPILTL PPKDTKTIRL DLTDSEREFY QAILARSQAI FEGFIHDGKA
ATSYMQIFGM LQRLRQVCDH IGLTVQSRFR SEEKKSKKAP VDDGEIPDSN EDALGKDFLN
GLLNKFCSKQ HSSRKQKGEH ENNESPKKPR LDENYLSQVT TQLSKIVADK NATHLNEECS
ICLEAPKVED TVLTPCAHIF CRACLVGSLQ RVTNENNKNH SSHPASQCPD GECPNCSEPV
SAQYIVALTR LEDGTVSSRF LFEAASNKPS VAVTAITPSW KQQEETTMAA RQILTNAIDR
TESSKIRAIM DELNNIWQLD PGSKVLAFSH YLGFLDLLEI QFRSVGIGYY RLDGSLSLKE
RMAVLEAFAT AQGKGNKGVV LLMSMMAGAE GLNLVSASSC LICDPWWNQA KEDQCINRIH
RIGQQAKVVR IRRFIVNDSV EERILELQNR KKFIADEIYN SQKRGDAVGG GTARLGLDDF
KLIFRR
//
