ID A0A1Z5KC15_FISSO Unreviewed; 1230 AA.
AC A0A1Z5KC15;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 28-JUN-2023, entry version 20.
DE SubName: Full=Alanine racemase {ECO:0000313|EMBL:GAX23746.1};
DE EC=5.1.1.1 {ECO:0000313|EMBL:GAX23746.1};
GN ORFNames=FisN_12Hh324 {ECO:0000313|EMBL:GAX23746.1};
OS Fistulifera solaris (Oleaginous diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Naviculaceae;
OC Fistulifera.
OX NCBI_TaxID=1519565 {ECO:0000313|EMBL:GAX23746.1, ECO:0000313|Proteomes:UP000198406};
RN [1] {ECO:0000313|EMBL:GAX23746.1, ECO:0000313|Proteomes:UP000198406}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JPCC DA0580 {ECO:0000313|EMBL:GAX23746.1,
RC ECO:0000313|Proteomes:UP000198406};
RX PubMed=25634988; DOI=10.1105/tpc.114.135194;
RA Tanaka T., Maeda Y., Veluchamy A., Tanaka M., Abida H., Marechal E.,
RA Bowler C., Muto M., Sunaga Y., Tanaka M., Yoshino T., Taniguchi T.,
RA Fukuda Y., Nemoto M., Matsumoto M., Wong P.S., Aburatani S., Fujibuchi W.;
RT "Oil accumulation by the oleaginous diatom Fistulifera solaris as revealed
RT by the genome and transcriptome.";
RL Plant Cell 27:162-176(2015).
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAX23746.1}.
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DR EMBL; BDSP01000203; GAX23746.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Z5KC15; -.
DR InParanoid; A0A1Z5KC15; -.
DR OrthoDB; 5472188at2759; -.
DR Proteomes; UP000198406; Unassembled WGS sequence.
DR GO; GO:0008784; F:alanine racemase activity; IEA:UniProtKB-EC.
DR GO; GO:0043248; P:proteasome assembly; IEA:InterPro.
DR Gene3D; 3.20.20.10; Alanine racemase; 2.
DR InterPro; IPR009006; Ala_racemase/Decarboxylase_C.
DR InterPro; IPR011079; Ala_racemase_C.
DR InterPro; IPR001608; Ala_racemase_N.
DR InterPro; IPR020622; Ala_racemase_pyridoxalP-BS.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR029066; PLP-binding_barrel.
DR InterPro; IPR019538; PSMD5.
DR PANTHER; PTHR30511; ALANINE RACEMASE; 1.
DR PANTHER; PTHR30511:SF0; ALANINE RACEMASE, CATABOLIC-RELATED; 1.
DR Pfam; PF00842; Ala_racemase_C; 1.
DR Pfam; PF01168; Ala_racemase_N; 2.
DR Pfam; PF10508; Proteasom_PSMB; 1.
DR SMART; SM01005; Ala_racemase_C; 1.
DR SUPFAM; SSF50621; Alanine racemase C-terminal domain-like; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF51419; PLP-binding barrel; 2.
DR PROSITE; PS00395; ALANINE_RACEMASE; 1.
PE 4: Predicted;
KW Isomerase {ECO:0000256|ARBA:ARBA00023235, ECO:0000313|EMBL:GAX23746.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000198406}.
FT DOMAIN 1088..1230
FT /note="Alanine racemase C-terminal"
FT /evidence="ECO:0000259|SMART:SM01005"
FT REGION 520..545
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 796..820
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 847..876
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 853..876
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1230 AA; 134314 MW; 5AAC9BAAF1C20951 CRC64;
MPVDTSANEK VLSRLQQLCQ GLATSQSLDP QMMKELKNNS SPANTMSVLV PFLFRDVHEN
NIISSSEALS LMGALVASEP TVFLKPTSQA VLEEVTRLSQ STTDPLCVSS ELLLVIVSQL
RGEDVQVADN ATTVLVCTAR RLGSVFVEQV IPVLQNLWKE SWQQLISSSG PTAVNASTTC
VRCGTAMVEL VLMEDTFMRV ALSTAAFNSI VTTLTYDSDP LLQISALDLF ERLASTQPFH
PSRTQWLLTS QEGFPLRTIL SMAGVSADSS SKVPDALLGG SALRVVARLC KLLHWDTTRA
TAEHDSHFLL TSFHKALHHW DEQTSGSEVD RFTMIDAISA FASASDEAME LIISDPVTRY
AWLSFQSVAQ SKLKAAILIS IAHVLDPSMI IVENTDSWTP KPPSDAMTMK LFACIGEANS
SSFRGDTMEL LLSMVRSPNP EVRLGVYELL RAVAKMPTAG QVLWNHGEFF PMMLSRDMEQ
TKEGREAKYA IIQAILSSPL KGLLSDELFS GRPSAGNMTR PRTFSSYHCS TSNSPTPEAE
GRTKGVTVDD QTQLRQTIKS KEEEQRVVHR ICLSALEHNY ACVEAAANEQ SCSVITVVKA
DGYGHGAIAT ALHLADCCGA DAFAVATLEE AIQLRRAFEN NPPGRWSKQL ASHFHVALDS
SHPSFWANVT SSTHNDDVEP VSLRNPSMRP SRIRIIVLGP PVNFPRCFDD YLYHGIELMV
SGPEVAEQLL AWVRNSKERK CIEVEQAANE AKAKALFAPL VPRDADQAQN NNFKVPVNLD
LPNVLKDNLT HNSLWNPQDS GTEDGHPINR QSLIHPPNTL GNVQGQDLAK EVRALLLGQK
AAKEAVNQLE ERQGKALASN PVSTDNSSTE SHDTERQVFV SAPNSDSQTR KTCSVFAGID
AEARNARARE LAKMNSNHNI GTFGEMDGGS TTACSAALSM AVRKRLRWHA SVDTGMGRLG
FKVDKPDKNE QRRDTIEILK ELVDAEILFN APIEFFGMCT HMAEANATST YSHSQMEKFI
FLLNRVRAAG INVPTVSTDN SAALLTTSLT HFDAEKILSQ DGSTTRGFVR VGGAIFGQRP
AFPQLKAVST LCASIRHVAI LKTGDSVGYD RAYVAPHDVR IATLTIGFAD GYPRALGNGV
GKVQIRGKVF PVAGNICMDM MMVDLGPVGD KEDKVGASVR VGDTAILWGP ADEEEDQGMV
RLQDIAEELK TTLSALTCGL DKMRVKRYFI
//