ID A0A1Z5R3Q5_SORBI Unreviewed; 350 AA.
AC A0A1Z5R3Q5;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=Tubby-like F-box protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3009G230500 {ECO:0000313|EMBL:OQU78418.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:OQU78418.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:OQU78418.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the TUB family. {ECO:0000256|ARBA:ARBA00007129}.
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DR EMBL; CM000768; OQU78418.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Z5R3Q5; -.
DR EnsemblPlants; OQU78418; OQU78418; SORBI_3009G230500.
DR Gramene; OQU78418; OQU78418; SORBI_3009G230500.
DR Proteomes; UP000000768; Chromosome 9.
DR ExpressionAtlas; A0A1Z5R3Q5; baseline and differential.
DR Gene3D; 1.20.1280.50; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR025659; Tubby-like_C.
DR InterPro; IPR000007; Tubby_C.
DR InterPro; IPR018066; Tubby_C_CS.
DR PANTHER; PTHR16517:SF157; TUBBY-LIKE F-BOX PROTEIN 10; 1.
DR PANTHER; PTHR16517; TUBBY-RELATED; 1.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF01167; Tub; 1.
DR PRINTS; PR01573; SUPERTUBBY.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF54518; Tubby C-terminal domain-like; 1.
DR PROSITE; PS01200; TUB_1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 52..70
FT /note="F-box"
FT /evidence="ECO:0000259|Pfam:PF00646"
FT DOMAIN 88..319
FT /note="Tubby C-terminal"
FT /evidence="ECO:0000259|Pfam:PF01167"
SQ SEQUENCE 350 AA; 39471 MW; B858F14363713B12 CRC64;
MAAPLVPREE GLRQEGAVEQ EEEDRWACLL PELLAEVLRR LEASGGERWP ARKDVVSCAC
VCRRWRDVAA TVVRPLPESG KITFLASLKQ PGPKDFPIQC FIKRNKKNSL FYLYLGLTNN
PMMPATDKGK FLMAAKRFRR GAPTEYIISL DADDISQGNK AYVGKLRSDF LGTNFKIYDS
QPPYDGAKAS STRSIRRFGS RRISPQVSSG NFDVGQVSYK YNLLKSRGPR RMLCTMECPS
VQETWENSLK VMSFRQTGST ILRNNAPRWH EHLQCWCLNF HGRVTVASVK NFQLVATTDT
SHPDSVDDAE IVLQFGKDGC VHQLSHPLMS SGLPGAITMA FSCFMDRRYM
//
