ID A0A1Z5RGK8_SORBI Unreviewed; 797 AA.
AC A0A1Z5RGK8;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3005G026900 {ECO:0000313|EMBL:OQU82827.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:OQU82827.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:OQU82827.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000764; OQU82827.1; -; Genomic_DNA.
DR RefSeq; XP_002448947.1; XM_002448902.1.
DR AlphaFoldDB; A0A1Z5RGK8; -.
DR EnsemblPlants; OQU82827; OQU82827; SORBI_3005G026900.
DR GeneID; 8069275; -.
DR Gramene; OQU82827; OQU82827; SORBI_3005G026900.
DR KEGG; sbi:8069275; -.
DR eggNOG; KOG4197; Eukaryota.
DR InParanoid; A0A1Z5RGK8; -.
DR OMA; ELRHHAR; -.
DR OrthoDB; 887547at2759; -.
DR Proteomes; UP000000768; Chromosome 5.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 16.
DR PANTHER; PTHR47933:SF71; OS07G0513200 PROTEIN; 1.
DR PANTHER; PTHR47933; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 6.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 18.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 93..127
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 128..163
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 164..198
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 202..236
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 237..271
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 272..306
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 307..341
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 342..376
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 377..411
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 412..446
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 447..481
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 482..516
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 517..551
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 552..586
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 587..621
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 622..656
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 657..691
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 692..726
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 797 AA; 89679 MW; 54E9846CCD1F335A CRC64;
MSGRVSAVSN RCLELERVIG SRARSGSLGL DDALKLFDGL LTHARPASII AFNHLLTAVS
RVSGRRSSTT ESELVVSLFN RMIRECTIKV TPDLCTYSIL IGCFCRMGRL EHGFATFGLI
LKSGWRVNNI VINQLLKGLC DAKRLREAMD ILIKRMPELG CTPDVVSYNT LLKGFCNEKR
AEEALELLHM MADSQGRSCP PNVVSYATVI NGFFTEGQVD KAYNLFLEMM DRGIQPNVVT
YTTVIDGLCK AQVVDRAEGV FQQMIDKGVK PDNDTYNCLI HGYLSIGKWK EVVRMLEEMS
AHGLKPDCYT YGSLLNYLCN NGRCREARFF FDSMIRKGIK PNVAIYGILI HGYATKGALS
EMHDLLNLMV ENGLSPDHHI FNIIFTAYAK KAMIDEAMHI FNKMKQQGLS PDVVNFGALI
DALCKLGRVD DAVLKFNQMM NEGVAPNIFV FNSLVYGLCT VDKWEKAKEF YFEMLNQGIR
PDVVFFNTIL CNLCTKGQVM KAQRLIDLME RVGTRPDVIS YTTLIGGHCL VGRIDEAAKS
LDVMLSVGLK PDEWTYNTLL HGYCRAGRID DAYGVFREML RNGITPGVVT YSTILHGLFT
TRRFSEAKEL YLNMITSGKQ WNIWIYNIIL NGLSKNNCVD EAFKLFQSLC SKDFQLEITT
FNIMIGALFK SGRNEDAMHL FATISSYGLV PDVFTYCLIA ENLIEEGYLE EFDDLFSAME
KSGTTPNSRM LNALVRRLLH RGDITRAGAY LSKLDEKNFS LEASTTAMLI SLLSRDEYHH
HATSLPEKYR VLNEAKK
//
