ID A0A1Z5RM78_SORBI Unreviewed; 1470 AA.
AC A0A1Z5RM78;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=SMC hinge domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3004G132100 {ECO:0000313|EMBL:OQU84844.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:OQU84844.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:OQU84844.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SUBUNIT: Homodimer. {ECO:0000256|ARBA:ARBA00011738}.
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DR EMBL; CM000763; OQU84844.1; -; Genomic_DNA.
DR STRING; 4558.A0A1Z5RM78; -.
DR EnsemblPlants; OQU84844; OQU84844; SORBI_3004G132100.
DR Gramene; OQU84844; OQU84844; SORBI_3004G132100.
DR eggNOG; ENOG502QQS5; Eukaryota.
DR InParanoid; A0A1Z5RM78; -.
DR OMA; WRTDGGI; -.
DR Proteomes; UP000000768; Chromosome 4.
DR Gene3D; 3.30.565.10; Histidine kinase-like ATPase, C-terminal domain; 1.
DR InterPro; IPR036890; HATPase_C_sf.
DR PANTHER; PTHR33566; EN/SPM-LIKE TRANSPOSON-RELATED; 1.
DR PANTHER; PTHR33566:SF1; EN_SPM-LIKE TRANSPOSON-RELATED; 1.
DR Pfam; PF13589; HATPase_c_3; 1.
DR SUPFAM; SSF55874; ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT COILED 1117..1144
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1412..1446
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1470 AA; 165221 MW; 69E4DA9974F95D45 CRC64;
MANASNVYRF QVLLPSGLSS MLTFHNPGYE ISVSDLLLKV KGELGNTQWD VNGKVYLTDL
LDRIITDKIK LSNFDTKSVN ILKLHNMWDL TPQTDLLEEL PAEYSTESAL ADLTDNALQA
LWSNGHGERK LIKITLDKEK IVIFDTGRGM DGSDGNSISK WGTMGSSNHR VFRRKGIGQK
APYLVPFFGM FGYGGTIASM HLGRIAIVSS KTKESKKVFT LHLSKEALLK NPSSKNSEHT
WKTAGGLRDP SKEEILLSPH QSFTQYDEDS EWRNTRNPVE FEVNGVNLSE VPEGEVTVTN
MHSSNGPDFI VHMKFTQKAT ASCIAHARLR CVYFPIIQLR FEGCEIKENF DNFSRVSIRR
LGRLLPDARW GSLPFMVPKQ KKGQKAEFFR RCCKRVKCFV ETDAGLYPTR SKTDLAQHDP
FTKALRNWGS NYLNSSSAEE VDIEAHGKDG KLLSHKQFEK QYYDWITEMH EKYDAEMDGG
DDEPTLIINP SCKERLGISI DVEVVRVHTS ISRRGQTWRR GDHLKILKGA IGQVKTSFYT
LKNSLCTTLE YIVVEGLQGD ICGEARLICR PIEYPDGQGC YISKAEDTSP DIYIQESVSF
PCKIMDDGSW NQMLKKRKEK APASIEVIRN IHGLGGDLPY EDVMAGYQQP HEIIAVLRPG
NYKPSSTNLP DQKNIVKDDD LEMVMEVRYL MSKDGPAKLI HKRVKPSSHN DIDGLYVFPL
RGDSLIFSKS GVYQFIFSVF DKNRYYRVGC PIRCLAVRSH DKYGNRIPFL DTSSVIATIL
YGDDVLAQVD NIEVELSSDS LTLNIMDFRF KTSNLDLLRP KYEAKLKISS SADEFSGICR
CEVKPGHPST INIDMSLFPE KNLTPGRLID NFFLEVFDQF SNHVEEETKL NVHVDGMCFL
DKQFSVQKVN STGFIDLCGK LRVVWGFGSE ACITIFHNDK EIFTKIFQIA TRELKAVNVP
ESCRAGSFLE NITFEVYDSD GLIDESIDGP LHTLNITSNE LALVEGAQYA IKHGRCVLSR
VQLPHEQGTV TIMAYHTYYP DDLHIEIQLQ VQSFDLALTT LEDGSEPILS CPISFIECSN
LSLPSQLAPG QPSHLITYVK DVVKKTKNKV GDTLSKIKST EETLKSLCSR KGSLEKQIDT
IKDEIRFMVG SFIDAKELVR DKIRENIGTA ACVVCSSGDF FVDDVVGIVA LLGTVPDGKI
SRMLAVYLGK DDMLSVVCKT QEAANYIEKY NTDGGVDVDF GIHREASALG VPIKRRFAII
CLEDIEPYKG GVLLNSPQKE LNLAWPSPHA SKPKGFRGFA VNMINLSDDN LNITTSRGHG
LRETLFYSLF GELQVYETRN DMLQAMPYLN GGAISLDGGV MKGKGKLLLG YSDPKITFPV
VSGLPNTITS ESNDHLDVVT RTRNLDSKMK LLEVIETKIS EQKRLHEELV KEFNKRKRKF
EEIEERITQP CGNELVLRDL QQVKVEEPDP
//