ID A0A1Z5RNH6_SORBI Unreviewed; 389 AA.
AC A0A1Z5RNH6;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=PCI domain-containing protein {ECO:0000259|PROSITE:PS50250};
GN ORFNames=SORBI_3004G204800 {ECO:0000313|EMBL:OQU85258.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:OQU85258.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:OQU85258.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000763; OQU85258.1; -; Genomic_DNA.
DR RefSeq; XP_002454130.1; XM_002454085.1.
DR AlphaFoldDB; A0A1Z5RNH6; -.
DR STRING; 4558.A0A1Z5RNH6; -.
DR EnsemblPlants; OQU85258; OQU85258; SORBI_3004G204800.
DR GeneID; 8070615; -.
DR Gramene; OQU85258; OQU85258; SORBI_3004G204800.
DR KEGG; sbi:8070615; -.
DR eggNOG; KOG0687; Eukaryota.
DR InParanoid; A0A1Z5RNH6; -.
DR OMA; HEMRDAN; -.
DR OrthoDB; 166489at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR Gene3D; 1.25.40.570; -; 1.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR019585; Rpn7/CSN1.
DR InterPro; IPR045135; Rpn7_N.
DR InterPro; IPR049549; RPN7_PSMD6_C.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR14145:SF7; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6; 1.
DR PANTHER; PTHR14145; 26S PROTESOME SUBUNIT 6; 1.
DR Pfam; PF01399; PCI; 1.
DR Pfam; PF10602; RPN7; 1.
DR Pfam; PF21154; RPN7_PSMD6_C; 1.
DR SMART; SM00088; PINT; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50250; PCI; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 193..361
FT /note="PCI"
FT /evidence="ECO:0000259|PROSITE:PS50250"
FT COILED 70..101
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 389 AA; 44313 MW; 1A04C6F9F1FDBE71 CRC64;
MDGGAGEEGK QERHLVLAHK LFLLSHPAVD DLSKVALRAE VLDTVKSDDM ATLFESLVTA
GVLEADAALL AEMRGRIDEE IRKLDEKIAD AEENLGESEV REAHLAKSLY FIRVGEKEKA
LEQLKVTEGK TVAVGQKMDL VFHTLQIGFF YMDFDLISKS IEKAKNLFEE GGDWERKNRL
KVYEGLYCMA TRNFKKAASL FLDSISTFTT YELFPYDTFI FYTVLTSIIT LDRVSLKQKV
VDAPEILAVI GKVPHLSEFL NSLYNCQYKS FFVAFSGLTE QIKLDRYLQP HFRYYMREVR
TVVYSQFLES YKSVTMEAMA TAFGVSVDFI DQELSRFIAA GKLHCKIDKV AGVLETNRPD
ERNAFYQATI KQGDFLLNRI QKLSRVIDL
//