ID A0A1Z5SBR7_SORBI Unreviewed; 357 AA.
AC A0A1Z5SBR7;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE RecName: Full=XS domain-containing protein {ECO:0000259|Pfam:PF03468};
GN ORFNames=SORBI_3001G497900 {ECO:0000313|EMBL:OQU93195.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:OQU93195.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:OQU93195.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000760; OQU93195.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Z5SBR7; -.
DR STRING; 4558.A0A1Z5SBR7; -.
DR EnsemblPlants; OQU93195; OQU93195; SORBI_3001G497900.
DR Gramene; OQU93195; OQU93195; SORBI_3001G497900.
DR eggNOG; ENOG502QWIJ; Eukaryota.
DR InParanoid; A0A1Z5SBR7; -.
DR OMA; GIFIRCY; -.
DR Proteomes; UP000000768; Chromosome 1.
DR GO; GO:0031047; P:regulatory ncRNA-mediated gene silencing; IEA:InterPro.
DR Gene3D; 3.30.70.2890; XS domain; 1.
DR InterPro; IPR005380; XS_domain.
DR InterPro; IPR038588; XS_domain_sf.
DR PANTHER; PTHR46619:SF3; RNA RECOGNITION MOTIF XS DOMAIN PROTEIN; 1.
DR PANTHER; PTHR46619; RNA RECOGNITION MOTIF XS DOMAIN PROTEIN-RELATED; 1.
DR Pfam; PF03468; XS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 203..335
FT /note="XS"
FT /evidence="ECO:0000259|Pfam:PF03468"
FT REGION 36..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 40..61
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 63..89
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 357 AA; 40165 MW; 1181F080173E5BE9 CRC64;
MLLADGTVRT YFALPPDYPF EPAPLPPLPR HLLPRAAPDL WPPHQAPPPP PQMPMPMPVQ
MPPHEARRKH PADQDEGFPR HHKQPRLDGP HQPPPHAAVD RHALRRAFLK YAKMLNESSA
QRRSYLEGGR VPCLACGRSS KDFADVHGLV MHAYNPPNAD SLVDHLGLHK ALCVLMGWDY
TKVPENSKGY QSLPSDLVQA SREDLIVWPP TVIIHNTSTG RKKDGRFEGL GNKEMDKKMT
ELGFSGGKSK SLYGKEGHMG LTLIKFANNP SGLKEAERLA EFLERQDRGR VGWSRAHASR
SVDSDQNPLL VETDIRTAEK KRIFYGYLAI ASDLDELDSD SRKRAFLQSR REFDPNE
//
