ID A0A1Z9XC38_9ALTE Unreviewed; 974 AA.
AC A0A1Z9XC38;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=GGDEF domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CBB95_08900 {ECO:0000313|EMBL:OUX87562.1};
OS Alteromonas sp. TMED35.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Alteromonadaceae; Alteromonas/Salinimonas group; Alteromonas.
OX NCBI_TaxID=1986603 {ECO:0000313|EMBL:OUX87562.1, ECO:0000313|Proteomes:UP000196497};
RN [1] {ECO:0000313|EMBL:OUX87562.1, ECO:0000313|Proteomes:UP000196497}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TMED35 {ECO:0000313|EMBL:OUX87562.1};
RA Tully B.J., Sachdeva R., Graham E.D., Heidelberg J.F.;
RT "290 Metagenome-assembled Genomes from the Mediterranean Sea: a resource
RT for marine microbiology.";
RL Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OUX87562.1}.
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DR EMBL; NHCO01000066; OUX87562.1; -; Genomic_DNA.
DR Proteomes; UP000196497; Unassembled WGS sequence.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 3.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR013655; PAS_fold_3.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 2.
DR PANTHER; PTHR44757:SF11; DIGUANYLATE CYCLASE DGCE-RELATED; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08447; PAS_3; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 3.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 3.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 2.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
FT DOMAIN 366..419
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 420..494
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 497..547
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 579..717
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 726..974
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 974 AA; 109402 MW; 3C4FBEBC0E56EC19 CRC64;
MNSPDFPADE ALRLLALKRT ALLDSPPEER FDRITRLAAS VFNVDICLVS LVDSDRQWFK
SKVGIDDCQT SRSISFCGHA ILQDDVLVVQ NATKDARFSD NPLVLQKPNI RFYAGAPLRE
PGGQPIGTLC IIDSKEREFS QREKQQLRGF ADLVEHEIAK IDIEHLEQRL VASNLRTASI
IESLPDMVFV IDTHLRFTLC NEHPDLLKPK DEVLGQKLFD VLPVELANQM NRYVEKAFNS
NTLLQHQYTL NKLKQSFEAR YQKLNNSEVL VIVRNITNEK HKDDIINDNQ HLLDAVIDTN
NIGVWRLNLL DGQLIVNEKW ATLLGYELSE LMPINRRTWE CLTHPDDLVY AAQQIDEYAL
GLTSHYDVNI RMKHKNGQWK WINTRGKVAS NAPNGEVEWL LGTHFSIDEQ LQAESQLKET
SSKMSAVVDN LLDGIITIDS SGIMLTANQA AQSIFGYSHR ELIGQNVNML MDSPHREHHD
TYLSNYLSRG ISNITGQIRE LDAQRKDGST FPIELGVVEV SLNDDINFIG IVRDISERKK
REDKIHQLAF YDPLTSLPNR RLLLDRLYQA QSNCSRTGAH AALLFLDLDN FKDFNDSAGH
DKGDLLLCEV AQRLAQTVGH GGTVSRLSGD EFVILVTELS DTEEVAAAQS EALAVKLLTK
IGQQYDIEAI TYQCSASIGI TIFNRSADVV GDLLKQADMA MYKAKAAGRN RVCFFNPKMQ
ADVNTKAEII QELYTAISNE QFELYYQKQI DDQGHAIGVE VLLRWCHPMK GMISPAQFIP
IAEDTGLIVP IGQWVLQQAC QTLASWAKES AKEALTIAVN ISAIQFNKNN FVQTVLDALH
HTGANPRRLK LELTESMLVS DIADIQTKMS ALQQHGVMFS IDDFGTGYSS LFYLKXLPLN
QLKIDQAFVR DILVDDNDXA IAQSVITLSQ SLXLEVIAEG VETQAQRALL QXMGCXXYQG
XLFGKPCSID ELEI
//