ID A0A200QAD5_9MAGN Unreviewed; 781 AA.
AC A0A200QAD5;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Ribonuclease H domain {ECO:0000313|EMBL:OVA07433.1};
GN ORFNames=BVC80_8679g13 {ECO:0000313|EMBL:OVA07433.1};
OS Macleaya cordata.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Ranunculales; Papaveraceae; Papaveroideae;
OC Macleaya.
OX NCBI_TaxID=56857 {ECO:0000313|EMBL:OVA07433.1, ECO:0000313|Proteomes:UP000195402};
RN [1] {ECO:0000313|EMBL:OVA07433.1, ECO:0000313|Proteomes:UP000195402}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BLH2017 {ECO:0000313|Proteomes:UP000195402};
RC TISSUE=Root {ECO:0000313|EMBL:OVA07433.1};
RX PubMed=28552780; DOI=.1016/j.molp.2017.05.007;
RA Liu X., Liu Y., Huang P., Ma Y., Qing Z., Tang Q., Cao H., Cheng P.,
RA Zheng Y., Yuan Z., Zhou Y., Liu J., Tang Z., Zhuo Y., Zhang Y., Yu L.,
RA Huang J., Yang P., Peng Q., Zhang J., Jiang W., Zhang Z., Lin K., Ro D.K.,
RA Chen X., Xiong X., Shang Y., Huang S., Zeng J.;
RT "The Genome of Medicinal Plant Macleaya cordata Provides New Insights into
RT Benzylisoquinoline Alkaloids Metabolism.";
RL Mol. Plant 10:975-989(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OVA07433.1}.
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DR EMBL; MVGT01002549; OVA07433.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A200QAD5; -.
DR InParanoid; A0A200QAD5; -.
DR OrthoDB; 982161at2759; -.
DR Proteomes; UP000195402; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR026960; RVT-Znf.
DR PANTHER; PTHR33116:SF67; REVERSE TRANSCRIPTASE; 1.
DR PANTHER; PTHR33116; REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR Pfam; PF13966; zf-RVT; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000195402}.
FT DOMAIN 82..137
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|Pfam:PF00078"
FT DOMAIN 416..501
FT /note="Reverse transcriptase zinc-binding"
FT /evidence="ECO:0000259|Pfam:PF13966"
FT DOMAIN 629..746
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 781 AA; 88376 MW; CB4AE08D11634D07 CRC64;
MSNLNQHQKS KLPLTLNRWR SLGNQGGRRR TFYNSRSAPS LSLSLPSAIT PSNGSRFFFE
NVSFKPWPAF RSQDIATYHT PRNCTSVTHL LYADDTIIFL NGRTSSILGC MRFLERFCAC
SGQKINVEKS SFMLHSKSPA SLVNSISHLT GYQRKSAFMI YLGAPICDGR VKIRYFDDLL
TKIRIKLAGW KANFLTQGGK LIMIRHVLSS MAIYLLSAVS VPKSVLAKVN LMFSNFFWGS
HEGKPKRKWV SWNSICKPVS EGGLGVRNIE EVRRCFRLKA LWNALTSKSV WSNFIRGKYG
IHNRILSAYT PPQSATKFWK ECACLSAVLA TNSAWKVGQG DMSFWYENWS NAGILAETYI
GVPSCPDITL REAVGAGFSI NDLPADCIHK VKSLYDSRLT ADSDERLWAS NPDGIFSVKS
ALTHLRGLAP ICSFARYYWA DFIPKKLSVF FWRVLHKAVP VEARVQNCFI SLASACVCCV
QRQVESLDHL LFHGSIATSL WDHFAPPFGL HRQNFPDFRD FIWAWFNVAP VGSQMGSLAI
IAPIVIIWEI WSERNRRRHN EAHVSNYRTR FKVLKWIHDI NTRIKVVRHS PSALQNILGT
CGVSLTPVHR RKSKILRWST PPPGYFILNT DGASADLLAA GGGVIRDNRG NIVAAFYSFY
GPGTNNLAES RALLDGLLLC RQIGIRRIAV RVDSKLVASW YHLKYKIPWT ILRWWNKIRE
TARNLDLLVS HVYRELNAPA DAMANMGFST RTDHTFLSDF PPRIVGLAHL DRLGVPYFRK
A
//
