ID A0A200QSP4_9MAGN Unreviewed; 376 AA.
AC A0A200QSP4;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=Reverse transcriptase zinc-binding domain {ECO:0000313|EMBL:OVA13469.1};
GN ORFNames=BVC80_6915g1 {ECO:0000313|EMBL:OVA13469.1};
OS Macleaya cordata.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Ranunculales; Papaveraceae; Papaveroideae;
OC Macleaya.
OX NCBI_TaxID=56857 {ECO:0000313|EMBL:OVA13469.1, ECO:0000313|Proteomes:UP000195402};
RN [1] {ECO:0000313|EMBL:OVA13469.1, ECO:0000313|Proteomes:UP000195402}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BLH2017 {ECO:0000313|Proteomes:UP000195402};
RC TISSUE=Root {ECO:0000313|EMBL:OVA13469.1};
RX PubMed=28552780; DOI=.1016/j.molp.2017.05.007;
RA Liu X., Liu Y., Huang P., Ma Y., Qing Z., Tang Q., Cao H., Cheng P.,
RA Zheng Y., Yuan Z., Zhou Y., Liu J., Tang Z., Zhuo Y., Zhang Y., Yu L.,
RA Huang J., Yang P., Peng Q., Zhang J., Jiang W., Zhang Z., Lin K., Ro D.K.,
RA Chen X., Xiong X., Shang Y., Huang S., Zeng J.;
RT "The Genome of Medicinal Plant Macleaya cordata Provides New Insights into
RT Benzylisoquinoline Alkaloids Metabolism.";
RL Mol. Plant 10:975-989(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OVA13469.1}.
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DR EMBL; MVGT01001124; OVA13469.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A200QSP4; -.
DR InParanoid; A0A200QSP4; -.
DR Proteomes; UP000195402; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR026960; RVT-Znf.
DR PANTHER; PTHR47723; OS05G0353850 PROTEIN; 1.
DR PANTHER; PTHR47723:SF17; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN; 1.
DR Pfam; PF13456; RVT_3; 1.
DR Pfam; PF13966; zf-RVT; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleotidyltransferase {ECO:0000313|EMBL:OVA13469.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000195402};
KW RNA-directed DNA polymerase {ECO:0000313|EMBL:OVA13469.1};
KW Transferase {ECO:0000313|EMBL:OVA13469.1};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 174..194
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 56..141
FT /note="Reverse transcriptase zinc-binding"
FT /evidence="ECO:0000259|Pfam:PF13966"
FT DOMAIN 269..375
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 376 AA; 42932 MW; 0AA91E586A8EBFC3 CRC64;
MGWDELYLRD VLLSNFEGIV VDADLLSEIR ASSLQCVRAQ GTDDERLWGG SLDGVFSIKS
CYDMLCSHDD LWVFHSTFWD GFVPSKLGVF FWRLVQGVIL VNVVVQRCHI LLVSKYLCCV
SVKIETISHL FLDIDLARML WSWLCLLFRI PWPWNSSLNH LLMLWFHAFS KRSQIGMLSV
IIPIVVCWVI WLELNDRRFK SISHDDWFVK RKVLKWITDL NGTLIPKKKS VGWFGEVCSS
LFISLSPTPS KSICLVTWRG DDLSDFIPNT DGASVDDLVA EGGVIHSSNG SLLGAFYSFY
GEGSNNVAET RAILDGIRFY DRLGFFNVLL QSDSALVIRW FQGNCSIPWH LARYWQEIHH
VSSVVSSATN VYRQAN
//
